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This paper categorizes the parameterized complexity of the algorithmic problems Perfect Phylogeny and Triangulating Colored Graphs when parameterized by the number of genes and colors, respectively. We show that they are complete for the…

Computational Complexity · Computer Science 2023-11-28 Jorke M. de Vlas

The graph matching problem aims to discover a latent correspondence between the vertex sets of two observed graphs. This problem has proven to be quite challenging, with few satisfying methods that are computationally tractable and widely…

Computation · Statistics 2018-07-26 Fei Fang , Daniel L. Sussman , Vince Lyzinski

Perfect matchings and maximum weight matchings are two fundamental combinatorial structures. We consider the ratio between the maximum weight of a perfect matching and the maximum weight of a general matching. Motivated by the computer…

Discrete Mathematics · Computer Science 2018-11-08 Emilio Vital Brazil , Guilherme D. da Fonseca , Celina de Figueiredo , Diana Sasaki

While graphs and abstract data structures can be large and complex, practical instances are often regular or highly structured. If the instance has sufficient structure, we might hope to compress the object into a more succinct…

Computational Complexity · Computer Science 2024-12-02 Shreya Gupta , Boyang Huang , Russell Impagliazzo , Stanley Woo , Christopher Ye

Solution discovery asks whether a given (infeasible) starting configuration to a problem can be transformed into a feasible solution using a limited number of transformation steps. This paper investigates meta-theorems for solution…

Data Structures and Algorithms · Computer Science 2025-10-21 Nicolas Bousquet , Amer E. Mouawad , Stephanie Maaz , Naomi Nishimura , Sebastian Siebertz

We study combinatorial configurations with the associated point and line graphs being strongly regular. Examples not belonging to known classes such as partial geometries and their generalizations or elliptic semiplanes are constructed.…

Combinatorics · Mathematics 2025-09-30 Marién Abreu , Martin Funk , Vedran Krčadinac , Domenico Labbate

Topological data analysis and its main method, persistent homology, provide a toolkit for computing topological information of high-dimensional and noisy data sets. Kernels for one-parameter persistent homology have been established to…

Machine Learning · Computer Science 2019-06-06 René Corbet , Ulderico Fugacci , Michael Kerber , Claudia Landi , Bei Wang

We introduce a new notation for representing labeled regular bipartite graphs of arbitrary degree. Several enumeration problems for labeled and unlabeled regular bipartite graphs have been introduced. A general algorithm for enumerating all…

Discrete Mathematics · Computer Science 2015-12-31 Vivek S. Nittoor

We prove a complexity dichotomy theorem for a class of Holant problems on planar 3-regular bipartite graphs. The complexity dichotomy states that for every weighted constraint function $f$ defining the problem (the weights can even be…

Computational Complexity · Computer Science 2023-03-30 Jin-Yi Cai , Austen Z. Fan

In this study we consider the problem of triangulated graphs. Precisely we give a necessary and sufficient condition for a graph to be triangulated. This give an alternative characterization of triangulated graphs. Our method is based on…

Combinatorics · Mathematics 2018-11-21 R. Gargouri , H. Najar

Temporal graphs represent graph evolution over time, and have been receiving considerable research attention. Work on expressing temporal graph patterns or discovering temporal motifs typically assumes relatively simple temporal…

Databases · Computer Science 2022-05-31 Amir Pouya Aghasadeghi , Jan Van den Bussche , Julia Stoyanovich

Pattern counting in graphs is a fundamental primitive for many network analysis tasks, and a number of methods have been developed for scaling subgraph counting to large graphs. Many real-world networks carry a natural notion of strength of…

Social and Information Networks · Computer Science 2019-10-03 Raunak Kumar , Paul Liu , Moses Charikar , Austin R. Benson

For a finite collection of graphs ${\cal F}$, the \textsc{${\cal F}$-TM-Deletion} problem has as input an $n$-vertex graph $G$ and an integer $k$ and asks whether there exists a set $S \subseteq V(G)$ with $|S| \leq k$ such that $G…

Data Structures and Algorithms · Computer Science 2022-11-01 Petr A. Golovach , Giannos Stamoulis , Dimitrios M. Thilikos

Treewidth is a well-studied decompositional parameter to measure the tree-likeness of a graph. While the propositional satisfiability problem (SAT) is known to be tractable when parameterized by the treewidth of the underlying primal graph,…

Data Structures and Algorithms · Computer Science 2026-05-08 Robert Ganian , Marlene Gründel

In this article, we study parameterized complexity theory from the perspective of logic, or more specifically, descriptive complexity theory. We propose to consider parameterized model-checking problems for various fragments of first-order…

Computational Complexity · Computer Science 2007-05-23 Joerg Flum , Martin Grohe

The NP-hard general factor problem asks, given a graph and for each vertex a list of integers, whether the graph has a spanning subgraph where each vertex has a degree that belongs to its assigned list. The problem remains NP-hard even if…

Data Structures and Algorithms · Computer Science 2015-03-19 Gregory Gutin , Eun Jung Kim , Arezou Soleimanfallah , Stefan Szeider , Anders Yeo

We develop a framework for applying treewidth-based dynamic programming on graphs with "hybrid structure", i.e., with parts that may not have small treewidth but instead possess other structural properties. Informally, this is achieved by…

Data Structures and Algorithms · Computer Science 2019-08-28 Eduard Eiben , Robert Ganian , Thekla Hamm , O-joung Kwon

Graphs provide an efficient tool for object representation in various computer vision applications. Once graph-based representations are constructed, an important question is how to compare graphs. This problem is often formulated as a…

Machine Learning · Statistics 2010-04-30 Mikhail Zaslavskiy , Francis Bach , Jean-Philippe Vert

Sparse structures are frequently sought when pursuing tractability in optimization problems. They are exploited from both theoretical and computational perspectives to handle complex problems that become manageable when sparsity is present.…

Discrete Mathematics · Computer Science 2019-03-21 Yuri Faenza , Gonzalo Muñoz , Sebastian Pokutta

We examine the problem of maximizing the reachability of a given source in temporal graphs that are given as the union of k temporal paths, i.e., every given path is a sequence of edges with strictly increasing labels that denote…

Data Structures and Algorithms · Computer Science 2026-05-13 Argyrios Deligkas , Michelle Döring , Eduard Eiben , George Skretas , Georg Tennigkeit