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Protein subcellular localization is an important factor in normal cellular processes and disease. While many protein localization resources treat it as static, protein localization is dynamic and heavily influenced by biological context.…

Molecular Networks · Quantitative Biology 2022-12-13 Chris S. Magnano , Anthony Gitter

Over the last decade, PageRank has gained importance in a wide range of applications and domains, ever since it first proved to be effective in determining node importance in large graphs (and was a pioneering idea behind Google's search…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-26 Atish Das Sarma , Anisur Rahaman Molla , Gopal Pandurangan , Eli Upfal

We present FastRP, a scalable and performant algorithm for learning distributed node representations in a graph. FastRP is over 4,000 times faster than state-of-the-art methods such as DeepWalk and node2vec, while achieving comparable or…

Social and Information Networks · Computer Science 2019-09-02 Haochen Chen , Syed Fahad Sultan , Yingtao Tian , Muhao Chen , Steven Skiena

Exchangeable random graphs serve as an important probabilistic framework for the statistical analysis of network data. In this work we develop an alternative parameterization for a large class of exchangeable random graphs, where the nodes…

Statistics Theory · Mathematics 2020-05-01 Jing Lei

Graphs are widely used for modeling various types of interactions, such as email communications and online discussions. Many of such real-world graphs are temporal, and specifically, they grow over time with new nodes and edges. Counting…

Social and Information Networks · Computer Science 2023-01-04 Deukryeol Yoon , Dongjin Lee , Minyoung Choe , Kijung Shin

Network embedding has attracted an increasing attention over the past few years. As an effective approach to solve graph mining problems, network embedding aims to learn a low-dimensional feature vector representation for each node of a…

Social and Information Networks · Computer Science 2020-08-10 Xiao Shen , Fu-Lai Chung

The PageRank of a graph is a scalar function defined on the node set of the graph which encodes nodes centrality information of the graph. In this article, we use the PageRank function along with persistent homology to obtain a scalable…

Computational Geometry · Computer Science 2020-09-15 Mustafa Hajij , Elizabeth Munch , Paul Rosen

Understanding the structure of weighted signed networks is essential for analysing social systems in which relationships vary both in sign and strength. Despite significant advances in statistical network analysis, there is still a lack of…

Methodology · Statistics 2025-11-06 Alberto Caimo , Isabella Gollini

A key step in influence maximization in online social networks is the identification of a small number of users, known as influencers, who are able to spread influence quickly and widely to other users. The evolving nature of the…

Social and Information Networks · Computer Science 2021-04-15 Weihua Li , Yuxuan Hu , Shiqing Wu , Quan Bai , Edmund Lai

The volume of data generated by internet and social networks is increasing every day, and there is a clear need for efficient ways of extracting useful information from them. As those data can take different forms, it is important to use…

Machine Learning · Statistics 2017-05-25 Bertrand Lebichot , Marco Saerens

Random graph models have played a dominant role in the theoretical study of networked systems. The Poisson random graph of Erdos and Renyi, in particular, as well as the so-called configuration model, have served as the starting point for…

Statistical Mechanics · Physics 2014-12-03 M. E. J. Newman , Travis Martin

Fair graph clustering is crucial for ensuring equitable representation and treatment of diverse communities in network analysis. Traditional methods often ignore disparities among social, economic, and demographic groups, perpetuating…

Machine Learning · Computer Science 2024-10-22 Sina Baharlouei , Sadra Sabouri

We study the Equitable Connected Partition (ECP for short) problem, where we are given a graph G=(V,E) together with an integer p, and our goal is to find a partition of V into p parts such that each part induces a connected sub-graph of G…

Data Structures and Algorithms · Computer Science 2024-05-01 Václav Blažej , Dušan Knop , Jan Pokorný , Šimon Schierreich

Graph Neural Networks (GNNs) bring the power of deep representation learning to graph and relational data and achieve state-of-the-art performance in many applications. GNNs compute node representations by taking into account the topology…

Machine Learning · Computer Science 2021-09-10 Maria Kalantzi , George Karypis

In social network, a person located at the periphery region (marginal node) is likely to be treated unfairly when compared with the persons at the center. While existing fairness works on graphs mainly focus on protecting sensitive…

Machine Learning · Computer Science 2023-10-24 Xiaotian Han , Kaixiong Zhou , Ting-Hsiang Wang , Jundong Li , Fei Wang , Na Zou

How to characterize nodes and edges in dynamic attributed networks based on social aspects? We address this problem by exploring the strength of the ties between actors and their associated attributes over time, thus capturing the social…

Social and Information Networks · Computer Science 2022-07-15 Thiago H. P. Silva , Alberto H. F. Laender , Pedro O. S. Vaz de Melo

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

The statistical modeling of random networks has been widely used to uncover interaction mechanisms in complex systems and to predict unobserved links in real-world networks. In many applications, network connections are collected via…

Social and Information Networks · Computer Science 2023-03-21 Angus Chan , Tianxi Li

Besides the complexity in time or in number of messages, a common approach for analyzing distributed algorithms is to look at the assumptions they make on the underlying network. We investigate this question from the perspective of network…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-05-02 Arnaud Casteigts , Serge Chaumette , Afonso Ferreira

Identifying critical nodes and links in graphs is a crucial task. These nodes/links typically represent critical elements/communication links that play a key role in a system's performance. However, a majority of the methods available in…

Social and Information Networks · Computer Science 2022-05-31 Sai Munikoti , Laya Das , Balasubramaniam Natarajan
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