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Related papers: Subgraph Enumeration in Massive Graphs

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Let $G=(V,E)$ be an undirected graph without loops and multiple edges. A subset $C\subseteq V$ is called \emph{identifying} if for every vertex $x\in V$ the intersection of $C$ and the closed neighbourhood of $x$ is nonempty, and these…

Combinatorics · Mathematics 2009-02-04 Sylvain Gravier , Svante Janson , Tero Laihonen , Sanna Ranto

We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…

Data Structures and Algorithms · Computer Science 2013-08-02 Taku Onodera , Kunihiko Sadakane , Tetsuo Shibuya

This introduction to graphs and graph algebras provides the optimal bound for the number of all paths of length $k$ in a graph with $N\geq k$ edges and no loops. Our proof relies on a construction of a number of terminating algorithms that…

Rings and Algebras · Mathematics 2019-12-12 Piotr M. Hajac , Mariusz Tobolski

Many combinatorial optimization problems can be phrased in the language of constraint satisfaction problems. We introduce a graph neural network architecture for solving such optimization problems. The architecture is generic; it works for…

Artificial Intelligence · Computer Science 2020-02-12 Jan Toenshoff , Martin Ritzert , Hinrikus Wolf , Martin Grohe

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

In this paper, we present enumeration algorithms to list all preferred extensions of an argumentation framework. This task is equivalent to enumerating all maximal semikernels of a directed graph. For directed graphs on $n$ vertices, all…

Data Structures and Algorithms · Computer Science 2019-07-03 Serge Gaspers , Ray Li

Listing all triangles is a fundamental graph operation. Triangles can have important interpretations in real-world graphs, especially social and other interaction networks. Despite the lack of provably efficient (linear, or slightly…

Social and Information Networks · Computer Science 2014-07-07 Jonathan W. Berry , Luke A. Fostvedt , Daniel J. Nordman , Cynthia A. Phillips , C. Seshadhri , Alyson G. Wilson

The task of listing all triangles in an undirected graph is a fundamental graph primitive with numerous applications. It is trivially solvable in time cubic in the number of vertices. It has seen a significant body of work contributing to…

Data Structures and Algorithms · Computer Science 2018-12-24 Matthias Bentert , Till Fluschnik , André Nichterlein , Rolf Niedermeier

We show that for a number of parameterized problems for which only $2^{O(k)} n^{O(1)}$ time algorithms are known on general graphs, subexponential parameterized algorithms with running time $2^{O(k^{1-\frac{1}{1+\delta}} \log^2 k)}…

Data Structures and Algorithms · Computer Science 2016-10-26 Dániel Marx , Marcin Pilipczuk

Over the years, much research involving mobile computational entities has been performed. From modeling actual microscopic (and smaller) robots, to modeling software processes on a network, many important problems have been studied in this…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-04 Anisur Rahaman Molla , Kaushik Mondal , William K. Moses

We give an algorithm for finding the arboricity of a weighted, undirected graph, defined as the minimum number of spanning forests that cover all edges of the graph, in $\sqrt{n} m^{1+o(1)}$ time. This improves on the previous best bound of…

Data Structures and Algorithms · Computer Science 2025-07-22 Ruoxu Cen , Henry Fleischmann , George Z. Li , Jason Li , Debmalya Panigrahi

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

The importance of classifying connections in large graphs has been the motivation for a rich line of work on distributed subgraph finding that has led to exciting recent breakthroughs. A crucial aspect that remained open was whether…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-27 Keren Censor-Hillel , Dean Leitersdorf , David Vulakh

Motivated by the increasing need to understand the algorithmic foundations of distributed large-scale graph computations, we study a number of fundamental graph problems in a message-passing model for distributed computing where $k \geq 2$…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-07-07 Gopal Pandurangan , Peter Robinson , Michele Scquizzato

One interesting question is how a graph develops from some constrained random graph process, which is a fundamental mechanism in the formation and evolution of dynamic networks. The problem here is referred to the random $K_k$-removal…

Combinatorics · Mathematics 2022-01-07 Fang Tian , Zi-Long Liu , Xiang-Feng Pan

We initiate the algorithmic study of retracting a graph into a cycle in the graph, which seeks a mapping of the graph vertices to the cycle vertices, so as to minimize the maximum stretch of any edge, subject to the constraint that the…

Data Structures and Algorithms · Computer Science 2019-04-29 Samuel Haney , Mehraneh Liaee , Bruce M. Maggs , Debmalya Panigrahi , Rajmohan Rajaraman , Ravi Sundaram

In the area of beyond-planar graphs, i.e. graphs that can be drawn with some local restrictions on the edge crossings, the recognition problem is prominent next to the density question for the different graph classes. For 1-planar graphs,…

Data Structures and Algorithms · Computer Science 2021-08-04 Henry Förster , Michael Kaufmann , Chrysanthi N. Raftopoulou

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

Data Structures and Algorithms · Computer Science 2019-03-05 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

A graph $G$ is said to be a $(k,\ell)$-graph if its vertex set can be partitioned into $k$ independent sets and $\ell$ cliques. It is well established that the recognition problem for $(k,\ell)$-graphs is NP-complete whenever $k \geq 3$ or…

Discrete Mathematics · Computer Science 2025-10-21 Flavia Bonomo-Braberman , Min Chih Lin , Ignacio Maqueda

In the graph clustering problem with a planted solution, the input is a graph on $n$ vertices partitioned into $k$ clusters, and the task is to infer the clusters from graph structure. A standard assumption is that clusters induce…

Data Structures and Algorithms · Computer Science 2025-11-24 Hendrik Fichtenberger , Michael Kapralov , Ekaterina Kochetkova , Silvio Lattanzi , Davide Mazzali , Weronika Wrzos-Kaminska