Related papers: Generalized Huffman Coding for Binary Trees with C…
Recently, Cohen, Haeupler and Schulman gave an explicit construction of binary tree codes over polylogarithmic-sized output alphabet based on Pudl\'{a}k's construction of maximum-distance-separable (MDS) tree codes using…
A strengthened version of Harborth's well-known conjecture -- known as Kleber's conjecture -- states that every planar graph admits a planar straight-line drawing where every edge has integer length and each vertex is restricted to the…
In this paper, we study arbitrary infinite binary information systems each of which consists of an infinite set called universe and an infinite set of two-valued functions (attributes) defined on the universe. We consider the notion of a…
While every rooted binary phylogenetic tree is determined by its set of displayed rooted triples, such a result does not hold for an arbitrary rooted binary phylogenetic network. In particular, there exist two non-isomorphic rooted binary…
In this paper we study a family of algorithms, introduced by Chan [SODA 1999] and called LR-algorithms, for drawing ordered rooted binary trees. In particular, we are interested in constructing LR-drawings (that are drawings obtained via…
By extending the breadth first search algorithm to any d-type critical or subcritical irreducible branching forest, we show that such forests may be encoded through d independent, integer valued, d-dimensional random walks. An application…
Tree-level Feynman diagrams in a cubic scalar theory can be given a metric such that each edge has a length. The space of metric trees is made out of orthants joined where a tree degenerates. Here we restrict to planar trees since each…
In this paper we present novel algorithmic techniques with a O(H(N)+N/H(N)) time complexity for performing several types of queries and updates on general rooted trees, binary search trees and lists of size N. For rooted trees we introduce…
We study distorted metrics on binary trees in the context of phylogenetic reconstruction. Given a binary tree $T$ on $n$ leaves with a path metric $d$, consider the pairwise distances $\{d(u,v)\}$ between leaves. It is well known that these…
In this paper we consider the problem of connected edge searching of weighted trees. It is shown that there exists a polynomial-time algorithm for finding optimal connected search strategy for bounded degree trees with arbitrary weights on…
For a given independent and identically distributed (i.i.d.) source, Huffman code achieves the optimal average codeword length in the class of instantaneous code with a single code table. However, it is known that there exist time-variant…
We make progress on a number of open problems concerning the area requirement for drawing trees on a grid. We prove that 1. every tree of size $n$ (with arbitrarily large degree) has a straight-line drawing with area $n2^{O(\sqrt{\log\log…
We present a simple combinatorial proof of Postnikov's hook length formula for binary trees.
We are interested in the quantitative analysis of the compaction ratio for two classical families of trees: recursive trees and plane binary increasing trees. These families are typical representatives of tree models with a small depth.…
The vector space spanned by rooted forests admits two graded bialgebra structures. The first is defined by A. Connes and D. Kreimer using admissible cuts, and the second is defined by D. Calaque, K. Ebrahimi-Fard and the second author using…
The Aho, Hopcroft and Ullman (AHU) algorithm has been the state of the art since the 1970s for determining in linear time whether two unordered rooted trees are isomorphic or not. However, it has been criticized (by Campbell and Radford)…
In analogy to a concept of Fibonacci trees, we define the leaf-Fibonacci tree of size $n$ and investigate its number of nonisomorphic leaf-induced subtrees. Denote by $f_0$ the one vertex tree and $f_1$ the tree that consists of a root with…
We provide an $\Omega(n\log n) $ lower bound and an $O(n^2)$ upper bound for the smallest size of rooted binary trees (a.k.a. phylogenetic tree shapes), which are universal for rooted binary trees with $n$ leaves, i.e., contain all of them…
This note presents an encoding and a decoding algorithms for a forest of (labelled) rooted uniform hypertrees and hypercycles in linear time, by using as few as $n - 2$ integers in the range $[1,n]$. It is a simple extension of the…
We present a randomized algorithm for reconstructing directed rooted trees of $n$ nodes and node degree at most $d$, by asking at most $O(dn\log^2 n)$ path queries. Each path query takes as input an origin node and a target node, and…