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The brain is a highly complex organ consisting of a myriad of subsystems that flexibly interact and adapt over time and context to enable perception, cognition, and behavior. Understanding the multi-scale nature of the brain, i.e., how…

Neurons and Cognition · Quantitative Biology 2025-01-17 Adam S. Charles

This work investigates continual learning of two segmentation tasks in brain MRI with neural networks. To explore in this context the capabilities of current methods for countering catastrophic forgetting of the first task when a new one is…

Computer Vision and Pattern Recognition · Computer Science 2018-11-07 Chaitanya Baweja , Ben Glocker , Konstantinos Kamnitsas

Calcium imaging has become a fundamental neural imaging technique, aiming to recover the individual activity of hundreds of neurons in a cortical region. Current methods (mostly matrix factorization) are aimed at detecting neurons in the…

Applications · Statistics 2019-02-11 Gal Mishne , Adam S. Charles

Neurons process information in ways that depend on their cell type, connectivity, and the brain region in which they are embedded. However, inferring these factors from neural activity remains a significant challenge. To build…

Machine Learning · Computer Science 2025-12-02 Vinam Arora , Divyansha Lachi , Ian J. Knight , Mehdi Azabou , Blake Richards , Cole L. Hurwitz , Josh Siegle , Eva L. Dyer

We deal with the problem of bridging the gap between two scales in neuronal modeling. At the first (microscopic) scale, neurons are considered individually and their behavior described by stochastic differential equations that govern the…

Biological Physics · Physics 2010-11-09 Olivier Faugeras , Jonathan Touboul , Bruno Cessac

We introduce a framework for reasoning about what meaning is captured by the neurons in a trained neural network. We provide a strategy for discovering meaning by training a second model (referred to as an observer model) to classify the…

Machine Learning · Computer Science 2021-03-16 Eric E. Allen

Modern deep networks are highly complex and their inferential outcome very hard to interpret. This is a serious obstacle to their transparent deployment in safety-critical or bias-aware applications. This work contributes to post-hoc…

Computer Vision and Pattern Recognition · Computer Science 2023-10-10 Konstantinos P. Panousis , Sotirios Chatzis

Assessing where and how information is stored in biological networks (such as neuronal and genetic networks) is a central task both in neuroscience and in molecular genetics, but most available tools focus on the network's structure as…

Information Theory · Computer Science 2023-02-24 Clifford Bohm , Douglas Kirkpatrick , Victoria Cao , Christoph Adami

A common approach to interpreting spiking activity is based on identifying the firing fields---regions in physical or configuration spaces that elicit responses of neurons. Common examples include hippocampal place cells that fire at…

Neurons and Cognition · Quantitative Biology 2021-08-10 D. Akhtiamov , A. G. Cohn , Y. Dabaghian

Neural recordings are nonstationary time series, i.e. their properties typically change over time. Identifying specific changes, e.g. those induced by a learning task, can shed light on the underlying neural processes. However, such changes…

Quantitative Methods · Quantitative Biology 2013-01-28 Duncan A. J. Blythe , Frank C. Meinecke , Paul von Buenau , Klaus-Robert Mueller

Live fish recognition is one of the most crucial elements of fisheries survey applications where vast amount of data are rapidly acquired. Different from general scenarios, challenges to underwater image recognition are posted by poor image…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Meng-Che Chuang , Jenq-Neng Hwang , Kresimir Williams

Brain activity is intrinsically a neural dynamic process constrained by anatomical space. This leads to significant variations in spatial distribution patterns and correlation patterns of neural activity across variable and heterogeneous…

Machine Learning · Computer Science 2026-03-10 Hongjie Jiang , Yifei Tang , Shuqiang Wang

Network analysis is rapidly becoming a standard tool for studying functional magnetic resonance imaging (fMRI) data. In this framework, different brain areas are mapped to the nodes of a network, whose links depict functional dependencies…

Neurons and Cognition · Quantitative Biology 2017-05-30 Rainer Kujala , Enrico Glerean , Raj Kumar Pan , Iiro P. Jääskeläinen , Mikko Sams , Jari Saramäki

The recent advent of noisy intermediate-scale quantum devices, especially near-term quantum computers, has sparked extensive research efforts concerned with their possible applications. At the forefront of the considered approaches are…

Quantum Physics · Physics 2021-09-15 Johannes Jakob Meyer

The brain is immensely complex, with diverse components and dynamic interactions building upon one another to orchestrate a wide range of functions and behaviors. Understanding patterns of these complex interactions and how they are…

Neurons and Cognition · Quantitative Biology 2024-08-06 Suman Kulkarni , Dani S. Bassett

This paper introduces decentralized and modular neural network framework designed to enhance the scalability, interpretability, and performance of artificial intelligence (AI) systems. At the heart of this framework is a dynamic switch…

Neural and Evolutionary Computing · Computer Science 2025-04-28 Surajit Majumder , Paritosh Ranjan , Prodip Roy , Bhuban Padhan

Adaptive behavior, cognition and emotion are the result of a bewildering variety of brain spatiotemporal activity patterns. An important problem in neuroscience is to understand the mechanism by which the human brain's 100 billion neurons…

Neurons and Cognition · Quantitative Biology 2011-05-09 Paul Expert , Renaud Lambiotte , Dante R. Chialvo , Kim Christensen , Henrik Jeldtoft Jensen , David J. Sharp , Federico Turkheimer

Recent experimental advances in neuroscience have opened new vistas into the immense complexity of neuronal networks. This proliferation of data challenges us on two parallel fronts. First, how can we form adequate theoretical frameworks…

Neurons and Cognition · Quantitative Biology 2015-06-12 Madhu Advani , Subhaneil Lahiri , Surya Ganguli

Neurons can code for multiple variables simultaneously and neuroscientists are often interested in classifying neurons based on their receptive field properties. Statistical models provide powerful tools for determining the factors…

Neurons and Cognition · Quantitative Biology 2022-10-28 Mehrad Sarmashghi , Shantanu P. Jadhav , Uri T. Eden

Neural fields have emerged as a new data representation paradigm and have shown remarkable success in various signal representations. Since they preserve signals in their network parameters, the data transfer by sending and receiving the…

Computer Vision and Pattern Recognition · Computer Science 2022-07-21 Junwoo Cho , Seungtae Nam , Daniel Rho , Jong Hwan Ko , Eunbyung Park
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