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Artificial soft matter systems have appeared as important tools to harness mechanical motion for microscale manipulation. Typically, this motion is driven either by the external fields or by mutual interaction between the colloids. In the…

Soft Condensed Matter · Physics 2024-11-20 Rahul Chand , Ashutosh Shukla , Sneha Boby , G V Pavan Kumar

Motile living organisms routinely probe their surroundings to adapt in ever-evolving environments. Although synthetic microswimmers offer surrogates for self-propelled living entities, they often lack the complex feedback mechanisms that…

The approach for the description of the DNA conformational transformations on the mesoscopic scales in the frame of the double helix is presented. Due to consideration of the joint motions of DNA structural elements along the conformational…

Biomolecules · Quantitative Biology 2009-09-29 S. N. Volkov

We use Monte Carlo simulations to investigate the thermodynamical behaviour of aggregates consisting of few superparamagnetic particles in a colloidal suspension. The potential energy surface of this classical two-level system with a stable…

Recent experiments indicated that disorder effect in DNA may lead to a transition of the charge transport mechanism from band resonant tunnelling to thermal activated hopping. In this letter, based on Mott's variable-range hopping theory we…

Soft Condensed Matter · Physics 2013-12-16 Yong-Gang Yang , Peng-Gang Yin , Xin-Qi Li anf YiJing Yan

Graph vertex embeddings based on random walks have become increasingly influential in recent years, showing good performance in several tasks as they efficiently transform a graph into a more computationally digestible format while…

Machine Learning · Statistics 2021-07-22 Dominik Kloepfer , Angelica I. Aviles-Rivero , Daniel Heydecker

We observe and comprehend the dynamical Coulomb blockade suppression of the electrical conductance across an electronic quantum channel submitted to a temperature difference. A broadly tunable, spin-polarized Ga(Al)As quantum channel is…

Mesoscale and Nanoscale Physics · Physics 2021-05-26 H. Duprez , F. Pierre , E. Sivre , A. Aassime , F. D. Parmentier , A. Cavanna , A. Ouerghi , U. Gennser , I. Safi , C. Mora , A. Anthore

Nanoelectronics devices, such as quantum dot systems or single-molecule transistors, consist of a quantum nanostructure coupled to a macroscopic external electronic circuit. Thermoelectric transport between source and drain leads is…

Strongly Correlated Electrons · Physics 2022-09-05 Emma L. Minarelli , Jonas B. Rigo , Andrew K. Mitchell

Thermophoresis moves molecules along temperature gradients, typically from hot to cold. We superpose fluid flow with thermophoretic molecule flow under well defined microfluidic conditions, imaged by fluorescence microscopy. DNA is trapped…

Biological Physics · Physics 2007-05-23 Stefan Duhr , Dieter Braun

Molecular dynamics simulations are often used to provide feedback in the design workflow of DNA nanostructures. However, even with coarse-grained models, convergence of distributions from unbiased simulation is slow, limiting applications…

Soft Condensed Matter · Physics 2022-03-16 W. T. Kaufhold , W. Pfeifer , C. E. Castro , L. Di Michele

Using numerical simulations we study the pinning and dynamics of interacting colloids on periodic one-dimensional substrates. As a function of colloid density, temperature, and substrate strength, we find a variety of pinned and dynamic…

Soft Condensed Matter · Physics 2009-11-10 C. Reichhardt , C. J. Olson Reichhardt

The rich electron correlations and highly coherent transport in reconfigurable devices sketched by a conductive atomic force microscope tip at the LaAlO3/SrTiO3 interface have enabled the oxide platform an ideal playground for studying…

Mesoscale and Nanoscale Physics · Physics 2023-06-19 Dawei Qiu , Mengke Ha , Qing Xiao , Zhiyuan Qin , Danqing Liu , Changjian Ma , Guanglei Cheng , Jiangfeng Du

We study transport properties of the helical edge states of two-dimensional integer and fractional topological insulators via double constrictions. Such constrictions couple the upper and lower edges of the sample, and can be made and tuned…

Strongly Correlated Electrons · Physics 2013-09-25 Chia-Wei Huang , Sam T. Carr , Dmitri Gutman , Efrat Shimshoni , Alexander D. Mirlin

We use holography to study Conformal Phase Transitions, which are believed to be realized in four dimensional QCD and play an important role in walking technicolor models of electroweak symmetry breaking. At strong coupling they can be…

High Energy Physics - Theory · Physics 2012-07-17 David Kutasov , Jennifer Lin , Andrei Parnachev

Legged rovers provide enhanced mobility compared to wheeled platforms, enabling navigation on steep and irregular planetary terrains. However, traditional legged locomotion might be energetically inefficient and potentially dangerous to the…

We propose a nonlinear random walk model to describe the dynamics of dense contaminant plumes in porous media. A coupling between concentration and velocity fields is found, so that transport displays non-Fickian features. The qualitative…

Statistical Mechanics · Physics 2009-04-17 Andrea Zoia , Christelle Latrille , Alain Cartalade

We investigate the dynamics of DNA translocation through a nanopore driven by an external force using Langevin dynamics simulations in two dimensions (2D) to study how the translocation dynamics depend on the details of the DNA sequences.…

Soft Condensed Matter · Physics 2008-12-09 Kaifu Luo , Tapio Ala-Nissila , See-Chen Ying , Aniket Bhattacharya

The low-temperature transport properties of a molecule are studied in the field-effect transitor geometry. The molecule has an internal mechanical mode that modulates its electronic levels and renormalizes both the interactions and the…

Strongly Correlated Electrons · Physics 2008-01-23 P. S. Cornaglia , Gonzalo Usaj , C. A. Balseiro

We predict a thermodynamic magnon recoil effect for domain wall motions in the presence of temperature gradients. All current thermodynamic theories assert that a magnetic domain wall must move toward the hotter side, based on equilibrium…

Mesoscale and Nanoscale Physics · Physics 2015-10-01 Peng Yan , Yunshan Cao , Jairo Sinova

We study the electronic properties of DNA by way of a tight-binding model applied to four particular DNA sequences. The charge transfer properties are presented in terms of localisation lengths, crudely speaking the length over which…

Genomics · Quantitative Biology 2007-05-23 Daphne Klotsa , Rudolf A. Roemer , Matthew S. Turner