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Synchronization of actively oscillating organelles such as cilia and flagella facilitates self-propulsion of cells and pumping fluid in low Reynolds number environments. To understand the key mechanism behind synchronization induced by…

Soft Condensed Matter · Physics 2015-05-20 Nariya Uchida , Ramin Golestanian

A system of active colloidal particles driven by harmonic potentials to oscillate about the vertices of a regular polygon, with hydrodynamic coupling between all particles, is described by a piece-wise linear model which exhibits various…

Statistical Mechanics · Physics 2013-05-30 Giovanni M. Cicuta , Enrico Onofri , Marco Cosentino Lagomarsino , Pietro Cicuta

Holographic optical tweezers are used to construct a static bistable optical potential energy landscape where a Brownian particle experiences restoring forces from two nearby optical traps and undergoes thermally activated transitions…

Mesoscale and Nanoscale Physics · Physics 2015-06-03 Arran Curran , Michael P. Lee , Roberto Di Leonardo , Jonathan M. Cooper , Miles J. Padgett

Ellipsoidal micron-sized colloidal particles can oscillate spontaneously when trapped in a focused laser beam. If two oscillating particles are held in proximity their oscillations synchronize through hydrodynamic interactions. The degree…

Fluid Dynamics · Physics 2015-03-23 Ivna Kavre , Andrej Vilfan , Dušan Babič

Motivated by the observed coordination of nearby beating cilia, we use a scale model experiment to show that hydrodynamic interactions can cause synchronization between rotating paddles driven at constant torque in a very viscous fluid.…

Soft Condensed Matter · Physics 2010-05-26 Bian Qian , Hongyuan Jiang , David A. Gagnon , Kenneth S. Breuer , Thomas R. Powers

Synchronization induced by long-range hydrodynamic interactions is attracting attention as a candidate mechanism behind coordinated beating of cilia and flagella. Here we consider a minimal model of hydrodynamic synchronization in the low…

Soft Condensed Matter · Physics 2012-11-26 Nariya Uchida , Ramin Golestanian

Some types of bacteria use rotating helical flagella to swim. The motion of such organisms takes place in the regime of low Reynolds numbers where viscous effects dominate and where the dynamics is governed by hydrodynamic interactions.…

Soft Condensed Matter · Physics 2007-05-23 M. Reichert , H. Stark

Colloidal particles moving in a fluid interact via the induced velocity field. The collective dynamic state for a class of actively forced colloids, driven by harmonic potentials via a rule that couples forces to configurations, to perform…

Soft Condensed Matter · Physics 2011-10-11 Loïc Damet , Giovanni M. Cicuta , Jurij Kotar , Marco Cosentino Lagomarsino , Pietro Cicuta

The nature of emergent collective behaviors of moving physical agents interacting with their neighborhood is a long-standing open issue in physical and biological systems alike. This calls for studies on the control of synchronization and…

Statistical Mechanics · Physics 2017-08-11 Tirthankar Banerjee , Abhik Basu

We introduce a phenomenological theory for a new class of soft active fluids, with the ability to synchronise. Our theoretical framework describes the macroscopic behaviour of a collection of interacting anisotropic elements with cyclic…

Soft Condensed Matter · Physics 2015-06-16 M. Leoni , T. B. Liverpool

We study synchronization of an array of rotors on a substrate that are coupled by hydrodynamic interaction. The rotors that are modeled by an effective rigid body, are driven by an internal torque and exerts an active force on the…

Soft Condensed Matter · Physics 2010-04-29 Nariya Uchida , Ramin Golestanian

Vortical flows of rotating particles describe interactions ranging from molecular machines to atmospheric dynamics. Yet to date, direct observation of the hydrodynamic coupling between artificial micro-rotors has been restricted by the…

Soft Condensed Matter · Physics 2023-08-02 Matan Yah Ben Zion , Alvin Modin , Paul M. Chaikin

We calculate the hydrodynamic flow field generated far from a cilium which is attached to a surface and beats periodically. In the case of two beating cilia, hydrodynamic interactions can lead to synchronization of the cilia, which are…

Biological Physics · Physics 2007-05-23 Andrej Vilfan , Frank Julicher

We survey the theory synchronization in collections of noisy oscillators. This framework is applied to flagellar synchronization by hydrodynamic interactions. The time-reversibility of hydrodynamics at low Reynolds numbers prompts swimming…

Cell Behavior · Quantitative Biology 2016-11-23 B. M. Friedrich

Inspired by dense contractile tissues, where cells are subject to periodic deformation, we formulate and study a generic hydrodynamic theory of pulsating active liquids. Combining mechanical and phenomenological arguments, we postulate that…

Soft Condensed Matter · Physics 2025-09-25 Tirthankar Banerjee , Thibault Desaleux , Jonas Ranft , Étienne Fodor

A density oscillator is a fluid system in which oscillatory flow occurs between different density fluids through the pore connecting them. We investigate the synchronization in coupled density oscillators using two-dimensional hydrodynamic…

Pattern Formation and Solitons · Physics 2023-03-27 Nana Takeda , Hiroaki Ito , Hiroyuki Kitahata

Cilia and flagella in biological systems often show large scale cooperative behaviors such as the synchronization of their beats in "metachronal waves". These are beautiful examples of emergent dynamics in biology, and are essential for…

Soft Condensed Matter · Physics 2016-04-20 Nicolas Bruot , Pietro Cicuta

To gain insight into the nature of biological synchronization at the microscopic scale, we here investigate the hydrodynamic synchronization between conically rotating objects termed nodal cilia. A mechanical model of three rotating cilia…

Soft Condensed Matter · Physics 2018-03-28 Keiji Okumura , Seiya Nishikawa , Toshihiro Omori , Takuji Ishikawa , Atsuko Takamatsu

We study synchronization in bulk suspensions of spherical microswimmers with chiral trajectories using large scale numerics. The model is generic. It corresponds to the lowest order solution of a general model for self-propulsion at low…

Soft Condensed Matter · Physics 2023-01-18 Sotiris Samatas , Juho S. Lintuvuori

We study, numerically, the collective dynamics of self-rotating nonaligning particles by considering a monolayer of spheres driven by constant clockwise or counterclockwise torques. We show that hydrodynamic interactions alter the emergence…

Soft Condensed Matter · Physics 2016-03-24 Kyongmin Yeo , Enkeleida Lushi , Petia M. Vlahovska
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