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We propose an approach for learning optimal tree-based prescription policies directly from data, combining methods for counterfactual estimation from the causal inference literature with recent advances in training globally-optimal decision…

Machine Learning · Computer Science 2020-12-07 Maxime Amram , Jack Dunn , Ying Daisy Zhuo

A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues…

Populations and Evolution · Quantitative Biology 2008-04-25 Michael G. Sadovsky

Using German forest health monitoring data we investigate the main drivers leading to tree mortality and the association between defoliation and mortality; in particular (a) whether defoliation is a proxy for other covariates (climate,…

We propose a simple model for scaffold aided bone regeneration. In this model, only macroscopic quantities, e.g., locally averaged osteoblast densities, are considered. This allows for use of this model in an optimization algorithm, whose…

Tissues and Organs · Quantitative Biology 2021-10-15 Patrick Dondl , Marius Zeinhofer

Recent studies have adopted an approach of selecting accurate and diverse trees based on individual or collective performance within an ensemble for classification and regression problems. This work follows in the wake of these…

Applications · Statistics 2020-05-20 Naz Gul , Nosheen Faiz , Dan Brawn , Rafal Kulakowski , Zardad Khan , Berthold Lausen

We investigate the evolutionary dynamics of an idealised model for the robust self-assembly of two-dimensional structures called polyominoes. The model includes rules that encode interactions between sets of square tiles that drive the…

Populations and Evolution · Quantitative Biology 2013-09-03 Iain G. Johnston , Sebastian A. Ahnert , Jonathan P. K. Doye , Ard A. Louis

By introducing the notions of living and dead nodes a new model of random tree evolution with continuous time parameter has been constructed. It is assumed that two random variables, the lifetime and the offspring number of living nodes…

Statistical Mechanics · Physics 2007-05-23 L. Pal

Tree shape statistics quantify some aspect of the shape of a phylogenetic tree. They are commonly used to compare reconstructed trees to evolutionary models and to find evidence of tree reconstruction bias. Historically, to find a useful…

Populations and Evolution · Quantitative Biology 2007-05-23 Frederick A. Matsen

Decision forest algorithms typically model data by learning a binary tree structure recursively where every node splits the feature space into two sub-regions, sending examples into the left or right branch as a result. In axis-aligned…

Machine Learning · Computer Science 2021-02-08 Mathieu Guillame-Bert , Sebastian Bruch , Petr Mitrichev , Petr Mikheev , Jan Pfeifer

Using linearized elasticity as a convenient mechanical framework, we show that volumetric growth can be formulated as an optimization-driven process in which the growth tensor is determined implicitly by constrained optimization rather than…

Mathematical Physics · Physics 2026-05-14 Rohan Abeyaratne , Roberto Paroni , Marco Picchi Scardaoni

We propose a model for evolution aiming to reproduce statistical features of fossil data, in particular the distributions of extinction events, the distribution of species per genus and the distribution of lifetimes, all of which are known…

Populations and Evolution · Quantitative Biology 2008-06-06 Peter Klimek , Stefan Thurner , Rudolf Hanel

Decision trees are among the most popular machine learning models and are used routinely in applications ranging from revenue management and medicine to bioinformatics. In this paper, we consider the problem of learning optimal binary…

Machine Learning · Computer Science 2023-07-20 Sina Aghaei , Andrés Gómez , Phebe Vayanos

We use the context of dryland vegetation to study a general problem of complex pattern forming systems - multiple pattern-forming instabilities that are driven by distinct mechanisms but share the same spectral properties. We find that the…

Pattern Formation and Solitons · Physics 2013-11-05 Shai Kinast , Yuval R. Zelnik , Golan Bel , Ehud Meron

Decision forests, including random forests and gradient boosting trees, remain the leading machine learning methods for many real-world data problems, especially on tabular data. However, most of the current implementations only operate in…

Machine Learning · Computer Science 2025-06-27 Haoyin Xu , Jayanta Dey , Sambit Panda , Joshua T. Vogelstein

Extremal graphical models are sparse statistical models for multivariate extreme events. The underlying graph encodes conditional independencies and enables a visual interpretation of the complex extremal dependence structure. For the…

Methodology · Statistics 2022-08-18 Sebastian Engelke , Stanislav Volgushev

We consider an age-size structured cell population model based on the cell cycle length. The model is described by a first order partial differential equation with initial-boundary conditions. Using the theory of semigroups of positive…

Analysis of PDEs · Mathematics 2022-06-15 Katarzyna Pichór , Ryszard Rudnicki

We study various types of consistency of honest decision trees and random forests in the regression setting. In contrast to related literature, our proofs are elementary and follow the classical arguments used for smoothing methods. Under…

Methodology · Statistics 2026-05-21 Martin Bladt , Rasmus Frigaard Lemvig

Plant-soil feedback is recognized as a causal mechanism for the emergence of vegetation patterns of the same species especially when water is not a limiting resource (e.g. humid environments). Nevertheless, in the field, plants rarely grow…

Populations and Evolution · Quantitative Biology 2026-04-10 Addolorata Marasco , Francesco Giannino , Annalisa Iuorio

For many linear and nonlinear systems that arise from the discretization of partial differential equations the construction of an efficient multigrid solver is a challenging task. Here we present a novel approach for the optimization of…

Numerical Analysis · Mathematics 2019-10-09 Jonas Schmitt , Sebastian Kuckuk , Harald Köstler

In this review some simple models of asexual populations evolving on smooth landscapes are studied. The basic model is based on a cellular automaton, which is analyzed here in the spatial mean-field limit. Firstly, the evolution on a fixed…

Statistical Mechanics · Physics 2016-11-23 Franco Bagnoli , Michele Bezzi