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Graph Neural Networks (GNNs) have shown remarkable success in molecular tasks, yet their interpretability remains challenging. Traditional model-level explanation methods like XGNN and GNNInterpreter often fail to identify valid…

Machine Learning · Computer Science 2025-04-25 Zhaoning Yu , Hongyang Gao

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

Artificial Intelligence · Computer Science 2018-11-14 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

We introduce Discovering Conceptual Network Explanations (DCNE), a new approach for generating human-comprehensible visual explanations to enhance the interpretability of deep neural image classifiers. Our method automatically finds visual…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Neehar Kondapaneni , Markus Marks , Oisin Mac Aodha , Pietro Perona

Machine learning provides algorithms that can learn from data and make inferences or predictions on data. Bayesian networks are a class of graphical models that allow to represent a collection of random variables and their condititional…

Artificial Intelligence · Computer Science 2019-01-08 Robert Leppert , Karl-Heinz Zimmermann

The paper evaluates the power of best-first search over AND/OR search spaces for solving the Most Probable Explanation (MPE) task in Bayesian networks. The main virtue of the AND/OR representation of the search space is its sensitivity to…

Artificial Intelligence · Computer Science 2012-06-26 Radu Marinescu , Rina Dechter

Interpretability is crucial for machine learning in many scenarios such as quantitative finance, banking, healthcare, etc. Symbolic regression (SR) is a classic interpretable machine learning method by bridging X and Y using mathematical…

Methodology · Statistics 2020-01-17 Ying Jin , Weilin Fu , Jian Kang , Jiadong Guo , Jian Guo

Exact inference of the most probable explanation (MPE) in Bayesian networks is known to be NP-complete. In this paper, we propose an algorithm for approximate MPE inference that is based on the incremental build-infer-approximate (IBIA)…

Artificial Intelligence · Computer Science 2022-06-07 Shivani Bathla , Vinita Vasudevan

Bayesian Belief Networks have been largely overlooked by Expert Systems practitioners on the grounds that they do not correspond to the human inference mechanism. In this paper, we introduce an explanation mechanism designed to generate…

Artificial Intelligence · Computer Science 2013-04-08 Peter Sember , Ingrid Zukerman

Causal discovery is crucial for understanding complex systems and informing decisions. While observational data can uncover causal relationships under certain assumptions, it often falls short, making active interventions necessary. Current…

Machine Learning · Computer Science 2024-06-18 Yuxuan Wang , Mingzhou Liu , Xinwei Sun , Wei Wang , Yizhou Wang

Convolutional neural networks (CNNs) provide flexible function approximations for a wide variety of applications when the input variables are in the form of images or spatial data. Although CNNs often outperform traditional statistical…

Methodology · Statistics 2024-05-24 Yeseul Jeon , Won Chang , Seonghyun Jeong , Sanghoon Han , Jaewoo Park

Stochastic reaction network models are often used to explain and predict the dynamics of gene regulation in single cells. These models usually involve several parameters, such as the kinetic rates of chemical reactions, that are not…

Computation · Statistics 2020-01-07 Thomas A. Catanach , Huy D. Vo , Brian Munsky

Counterfactual explanations (CFEs) are an emerging technique under the umbrella of interpretability of machine learning (ML) models. They provide ``what if'' feedback of the form ``if an input datapoint were $x'$ instead of $x$, then an ML…

Machine Learning · Computer Science 2021-06-16 Sahil Verma , John Dickerson , Keegan Hines

A new method is proposed for exploiting causal independencies in exact Bayesian network inference. A Bayesian network can be viewed as representing a factorization of a joint probability into the multiplication of a set of conditional…

Artificial Intelligence · Computer Science 2014-11-17 N. L. Zhang , D. Poole

In this paper, we propose a model for building natural language explanations for Bayesian Network Reasoning in terms of factor arguments, which are argumentation graphs of flowing evidence, relating the observed evidence to a target…

Artificial Intelligence · Computer Science 2024-10-24 Jaime Sevilla , Nikolay Babakov , Ehud Reiter , Alberto Bugarin

Counterfactual Explanations (CFEs) interpret machine learning models by identifying the smallest change to input features needed to change the model's prediction to a desired output. For classification tasks, CFEs determine how close a…

Machine Learning · Computer Science 2025-10-01 Margarita A. Guerrero , Cristian R. Rojas

Studies on generalization performance of machine learning algorithms under the scope of information theory suggest that compressed representations can guarantee good generalization, inspiring many compression-based regularization methods.…

Machine Learning · Computer Science 2019-10-16 Antoine Saporta , Yifu Chen , Michael Blot , Matthieu Cord

We propose a new approach to explain Bayesian Networks. The approach revolves around a new definition of a probabilistic argument and the evidence it provides. We define a notion of independent arguments, and propose an algorithm to extract…

Artificial Intelligence · Computer Science 2021-12-03 Jaime Sevilla

We present Causal Posterior Estimation (CPE), a novel method for Bayesian inference in simulator models, i.e., models where the evaluation of the likelihood function is intractable or too computationally expensive, but where one can…

Machine Learning · Computer Science 2025-05-28 Simon Dirmeier , Antonietta Mira

Mechanistic models can provide an intuitive and interpretable explanation of network growth by specifying a set of generative rules. These rules can be defined by domain knowledge about real-world mechanisms governing network growth or may…

Social and Information Networks · Computer Science 2025-12-04 Maxwell H Wang , Till Hoffmann , Jukka-Pekka Onnela

In many contexts, there is interest in selecting the most important variables from a very large collection, commonly referred to as support recovery or variable, feature or subset selection. There is an enormous literature proposing a rich…

Computation · Statistics 2015-06-23 Willem van den Boom , Galen Reeves , David B. Dunson