Related papers: A forest of linear fractional transformations
The Sackin and Colless indices are two widely-used metrics for measuring the balance of trees and for testing evolutionary models in phylogenetics. This short paper contributes two results about the Sackin and Colless indices of trees. One…
We show that if a strictly positive joint probability distribution for a set of binary random variables factors according to a tree, then vertex separation represents all and only the independence relations enclosed in the distribution. The…
Cartesian tree matching is the problem of finding all substrings of a given text which have the same Cartesian trees as that of a given pattern. So far there is one linear-time solution for Cartesian tree matching, which is based on the KMP…
We study the enumeration of spinal tree-child phylogenetic networks, a rigid family of tree-child networks in which all internal vertices lie on a single root--to--leaf path. We provide two complementary combinatorial frameworks. First, we…
We give a short proof of Cayley's tree formula for counting the number of different labeled trees on $n$ vertices. The following nonlinear recursive relation for the number of labeled trees on $n$ vertices is deduced from a combinatorial…
Generating trees are a useful technique in the enumeration of various combinatorial objects, particularly restricted permutations. Quite often the generating tree for the set of permutations avoiding a set of patterns requires infinitely…
A tree with at most $k$ leaves is called a $k$-ended tree. A spanning 2-ended tree is a Hamilton path. A Hamilton cycle can be considered as a spanning 1-ended tree. The earliest result concerning spanning trees with few leaves states that…
We consider a family of infinite sums of products of Catalan numbers, indexed by trees. We show that these sums are polynomials in $1/\pi$ with rational coefficients; the proof is effective and provides an algorithm to explicitly compute…
Meadows are a sort of commutative rings with a multiplicative identity element and a total multiplicative inverse operation. In this paper we study algebraic properties of common meadows, which are meadows that introduce, as the inverse of…
A fringe subtree of a rooted tree is a subtree induced by one of the vertices and all its descendants. We consider the problem of estimating the number of distinct fringe subtrees in two types of random trees: simply generated trees and…
In 1998, B\"{o}cker and Dress gave a 1-to-1 correspondence between symbolically dated rooted trees and symbolic ultrametrics. We consider the corresponding problem for unrooted trees. More precisely, given a tree $T$ with leaf set $X$ and a…
Multivariate decision trees are powerful machine learning tools for classification and regression that attract many researchers and industry professionals. An optimal binary tree has two types of vertices, (i) branching vertices which have…
The Strong Nine Dragon Tree Conjecture asserts that for any integers $k$ and $d$ any graph with fractional arboricity at most $k + \frac{d}{d+k+1}$ decomposes into $k+1$ forests, such that for at least one of the forests, every connected…
We answer three questions posed by Bubeck and Linial on the limit densities of subtrees in trees. We prove there exist positive $\varepsilon_1$ and $\varepsilon_2$ such that every tree that is neither a path nor a star has inducibility at…
We present two models of multitype Galton-Watson trees, that we call full binary trees and full binary trees with survivals. We show relevant relations between these trees and the Narayana numbers and the two-dimensional decompositions of…
We consider the phylogenetic tree model in which every node of the tree is observed and binary and the transitions are given by the same matrix on each edge of the tree. We are able to compute the Grobner basis and Markov basis of the toric…
The Stern-Brocot tree and Minkowki's question mark function $?(x)$ (or Conway's box function) are related to the continued fraction expansion of numbers from Q with unary encoding of the partial denominators. We first define binary…
We show that an algorithmic construction of sequences of recursive trees leads to a direct proof of the convergence of random recursive trees in an associated Doob-Martin compactification; it also gives a representation of the limit in…
We study the random Fibonacci tree, which is an infinite binary tree with non-negative integers at each node. The root consists of the number 1 with a single child, also the number 1. We define the tree recursively in the following way: if…
We consider the rooted trees which not have isomorphic representation and introduce a conception of complexity a natural number also. The connection between quantity such trees with $n$ edges and a complexity of natural number $n$ is…