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The theta rhythm is important for many cognitive functions including spatial processing, memory encoding, and memory recall. The information processing underlying these functions is thought to rely on consistent, phase-specific spiking…

Neurons and Cognition · Quantitative Biology 2025-10-16 Oleg Makarenkov , Marianne Bezaire , Michael Hasselmo

Feedback circuits in biochemical networks which underly cellular signaling pathways are important elements in creating complex behavior. A specific aspect thereof is how stability of equilibrium points depends on model parameters. For…

Molecular Networks · Quantitative Biology 2007-11-20 Steffen Waldherr , Frank Allgower

We investigate the dynamical formation of nonlinear patterns in one-dimensional ring condensates under bichromatic periodic modulation of the interaction strength. The stability phase diagram of the condensate's homogeneous density state is…

Quantum Gases · Physics 2025-11-11 Premabrata Manna , S. I. Mistakidis , P. G. Kevrekidis , Pankaj Kumar Mishra

Cardiac Magnetic Resonance (CMR) imaging is a vital non-invasive tool for diagnosing heart diseases and evaluating cardiac health. However, the limited availability of large-scale, high-quality CMR datasets poses a major challenge to the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-07 Ziyu Li , Yujian Hu , Zhengyao Ding , Yiheng Mao , Haitao Li , Fan Yi , Hongkun Zhang , Zhengxing Huang

Pluripotent embryonic stem cells are of paramount importance for biomedical research thanks to their innate ability for self-renewal and differentiation into all major cell lines. The fateful decision to exit or remain in the pluripotent…

Molecular Networks · Quantitative Biology 2018-07-04 Yen Ting Lin , Peter G. Hufton , Esther J. Lee , Davit A. Potoyan

We study a system of phase oscillators with nonlocal coupling in a ring that supports self-organized patterns of coherence and incoherence, called chimera states. Introducing a global feedback loop, connecting the phase lag to the order…

Chaotic Dynamics · Physics 2015-08-03 Matthias Wolfrum , Oleh Omel'chenko , Jan Sieber

Cells often exhibit different and stable phenotypes from the same DNA sequence. Robustness and plasticity of such cellular states are controlled by diverse transcriptional and epigenetic mechanisms, among them the modification of…

Molecular Networks · Quantitative Biology 2015-06-18 Daniel Jost

Cellular behavior is governed by gene regulatory processes that are intrinsically dynamic and nonlinear, and are subject to non-negligible amounts of random fluctuations. Such conditions are ubiquitous in physical systems, where they have…

Molecular Networks · Quantitative Biology 2011-09-21 Jordi Garcia-Ojalvo

Constructing electronic models of neurons has several applications including reproducing dynamics of biological neurons and their networks and neuroprosthetics. In the brain, most neurons themselves are in a non-oscillatory mode, and brain…

Adaptation and Self-Organizing Systems · Physics 2023-05-09 Nikita M. Egorov , Marina V. Sysoeva , Vladimir I. Ponomarenko , Ilya V. Sysoev

Zero-lag synchronization between distant cortical areas has been observed in a diversity of experimental data sets and between many different regions of the brain. Several computational mechanisms have been proposed to account for such…

Neurons and Cognition · Quantitative Biology 2014-05-07 Leonardo L. Gollo , Claudio Mirasso , Olaf Sporns , Michael Breakspear

Many cellular functions are based on the rhythmic organization of biological processes into self-repeating cascades of events. Some of these periodic processes, such as the cell cycles of several species, exhibit conspicuous irregularities…

Molecular Networks · Quantitative Biology 2011-09-30 Pau Rué , Gürol M. Süel , Jordi Garcia-Ojalvo

Classifier-free guidance (CFG) is a core technique powering state-of-the-art image generation systems, yet its underlying mechanisms remain poorly understood. In this work, we begin by analyzing CFG in a simplified linear diffusion model,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Xiang Li , Rongrong Wang , Qing Qu

The nervous system displays a variety of rhythms in both waking and sleep. These rhythms have been closely associated with different behavioral and cognitive states, but it is still unknown how the nervous system makes use of these rhythms…

Dynamical Systems · Mathematics 2007-05-23 Nancy Kopell

Biological rhythms are generated by pacemaker organs, such as the heart pacemaker organ (the sinoatrial node) and the master clock of the circadian rhythms (the suprachiasmatic nucleus), which are composed of a network of autonomously…

Cell Behavior · Quantitative Biology 2016-08-23 Hiroshi Kori , Yoji Kawamura , Naoki Masuda

We study the stability and interactions of chirped solitary pulses in a system of nonlinearly coupled cubic Ginzburg-Landau (CGL) equations with a group-velocity mismatch between them, where each CGL equation is stabilized by linearly…

Pattern Formation and Solitons · Physics 2009-11-07 H. E. Nistazakis , D. J. Frantzeskakis , J. Atai , B. A. Malomed , N. Efremidis , K. Hizanidis

Music, being a multifaceted stimulus evolving at multiple timescales, modulates brain function in a manifold way that encompasses not only the distinct stages of auditory perception but also higher cognitive processes like memory and…

Neurons and Cognition · Quantitative Biology 2018-02-06 Dimitrios A. Adamos , Nikolaos Laskaris , Sifis Micheloyannis

Cellular bioelectricity describes the biological phenomenon in which cells in living tissue generate and maintain patterns of voltage gradients induced by differing concentrations of charged ions. A growing body of research suggests that…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-27 Seth Gilbert , James Maguire , Calvin Newport

During developmental processes such as embryogenesis, how a group of cells fold into specific structures, is a central question in biology that defines how living organisms form. Establishing tissue-level morphology critically relies on how…

Soft Condensed Matter · Physics 2024-07-23 Haiqian Yang , Anh Q. Nguyen , Dapeng Bi , Markus J. Buehler , Ming Guo

Circadian rhythmicity lies at the center of various important physiological and behavioral processes in mammals, such as sleep, metabolism, homeostasis, mood changes and more. It has been shown that this rhythm arises from self-sustained…

Neurons and Cognition · Quantitative Biology 2023-02-08 Yorgos M. Psarellis , Michail Kavousanakis , Michael A. Henson , Ioannis G. Kevrekidis

Exploring and establishing artificial neural networks with electrophysiological characteristics and high computational efficiency is a popular topic in the field of computer vision. Inspired by the working mechanism of primary visual…

Neurons and Cognition · Quantitative Biology 2022-07-26 Jizhao Liu , Jing Lian , J C Sprott , Qidong Liu , Yide Ma
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