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Perceptual geometry refers to the interdisciplinary research whose objectives focuses on study of geometry from the perspective of visual perception, and in turn, applies such geometric findings to the ecological study of vision. Perceptual…

Neurons and Cognition · Quantitative Biology 2011-11-29 Arash Sangari , Hasti Mirkia , Amir H. Assadi

Plant morphogenesis relies on dynamic growth deformations at the cell and tissue scales driven by osmotic fluxes. A mechanistic understanding of this phenomenon demands a physical framework that integrates cell imbibition, tissue mechanics,…

Biological Physics · Physics 2025-12-08 Hadrien Oliveri , Christophe Godin , Ibrahim Cheddadi

A simple relation of the order of $n$ abstract objects generates an $n-2$ dimensional basis of three dimensional vectors. A cellular automaton-like model of evolution of this system is postulated. During this evolution, some quantities…

Cellular Automata and Lattice Gases · Physics 2017-08-14 Marek Pietrow

For the first time the phenomenon of cellular structure coarsening are consistently analysed from the positions of kinetic, hydrodynamic and stochastodynamic theories of nonequilibrium statistical systems. Thereby micro-, meso- and…

Condensed Matter · Physics 2015-06-25 S. B. Goryachev

A novel mechanism for cell differentiation is proposed, based on the dynamic clustering in a globally coupled chaotic system. A simple model with metabolic reaction, active transport of chemicals from media, and cell division is found to…

adap-org · Physics 2009-10-22 Kunihiko Kaneko , Tetsuya Yomo

A hydrodynamic formulation of the evolution of large-scale structure in the Universe is presented. It relies on the spatially coarse-grained description of the dynamical evolution of a many-body gravitating system. Because of the assumed…

Astrophysics · Physics 2009-10-31 Alvaro Dominguez

Morphogenesis, the process by which an adult organism emerges from a single cell, has fascinated humans for a long time. Modelling this process can provide novel insights into development and the principles that orchestrate the…

Tissues and Organs · Quantitative Biology 2018-06-13 M. D. Peters , L. D. Wittwer , A. Stopka , D. Barac , C. Lang , D. Iber

We develop a system that formally represents spatial semantics concepts within natural language descriptions of spatial arrangements. The system builds on a model of spatial semantics representation according to which words in a sentence…

Computation and Language · Computer Science 2021-11-30 Alexandros Haridis , Stella Rossikopoulou Pappa

The continuous software engineering paradigm is gaining popularity in modern development practices, where the interleaving of design and runtime activities is induced by the continuous evolution of software systems. In this context,…

Software Engineering · Computer Science 2024-01-31 Romina Eramo , Michele Tucci , Daniele Di Pompeo , Vittorio Cortellessa , Antinisca Di Marco , Davide Taibi

Classical approaches like process algebras or labelled transition systems deal with static composition to model non-trivial concurrent or distributed systems; this is not sufficient for systems with dynamic architecture and with variable…

Software Engineering · Computer Science 2011-12-30 Christian Attiogbé

Stochastic agent-based models can account for millions of cells with spatiotemporal movement that can be a function of different factors. However, these simulations can be computationally expensive. In this work, we develop a novel…

Numerical Analysis · Mathematics 2019-09-11 Michael A. Yereniuk , Sarah D. Olson

The importance of molecular-scale forces in sculpting biological form and function has been acknowledged for more than a century. Accounting for forces in biology is a problem that lies at the intersection of soft condensed matter physics,…

Soft Condensed Matter · Physics 2025-12-10 K. Vijay Kumar , Mandar M. Inamdar , Pramod A. Pullarkat , Gautam I. Menon

Cities are different around the world, but does this fact have any relation to culture? The idea that urban form embodies idiosyncrasies related to cultural identities captures the imagination of many in urban studies, but it is an…

Physics and Society · Physics 2020-06-29 Vinicius M. Netto , Edgardo Brigatti , Caio Cacholas

The rules in a shape grammar apply in terms of embedding to take advantage of the parts that emerge visually in the appearance of shapes. While the shapes are kept unanalyzed as a computation moves forward, part-structures for shapes can be…

Formal Languages and Automata Theory · Computer Science 2022-03-15 Alexandros Haridis , George Stiny

The understanding of morphogenesis in living organisms has been renewed by tremendous progressin experimental techniques that provide access to cell-scale, quantitative information both on theshapes of cells within tissues and on the genes…

Biological Physics · Physics 2015-09-30 Sham Tlili , Cyprien Gay , Francois Graner , Philippe Marcq , François Molino , Pierre Saramito

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

Cell Behavior · Quantitative Biology 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

Observations are inconsistent with a homogeneous and isotropic universe with ordinary matter and gravity. The universe is far from exact homogeneity and isotropy at late times, and the effect of the non-linear structures has to be…

Astrophysics · Physics 2012-05-01 Syksy Rasanen

A dynamic model for cell differentiation is studied, where cells with internal chemical reaction dynamics interact with each other and replicate. It leads to spontaneous differentiation of cells and determination, as is discussed in the…

adap-org · Physics 2007-05-23 Chikara Furusawa , Kunihiko Kaneko

Human dynamics and sociophysics suggest statistical models that may explain and provide us with better insight into social phenomena. Here we tackle the problem of determining the distribution of the population density of a social space…

Physics and Society · Physics 2020-02-18 Mark Levene , Trevor Fenner

The nature of the change in perspective that accompanies the proposal of a unified physical theory deriving from the single dimension of time is elaborated. On expressing a temporal interval in a multi-dimensional form, via a direct…

General Physics · Physics 2018-04-03 David J. Jackson
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