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In this paper, we consider the problem of detecting signals in multiple, sequentially observed data streams. For each stream, the exact distribution is unknown, but characterized by a parameter that takes values in either of two disjoint…

Methodology · Statistics 2025-07-30 Yiming Xing , Anamitra Chaudhuri , Yifan Chen

We investigate the static and dynamical behavior of 1D interacting fermions in disordered Hubbard chains, contacted to semi-infinite leads. The chains are described via the repulsive Anderson-Hubbard Hamiltonian, using static and…

Mesoscale and Nanoscale Physics · Physics 2013-03-27 V. Vettchinkina , A. Kartsev , D. Karlsson , C. Verdozzi

The increasing number of protein-based metamaterials demands reliable and efficient theoretical and computational methods to study the physicochemical properties they may display. In this regard, we develop a simulation strategy based on…

Soft Condensed Matter · Physics 2020-06-23 J. A. Campos Gonzalez Angulo , G. Wiesehan , R. F. Ribeiro , J. Yuen-Zhou

Locating a target is key in many applications, namely in high-stakes real-world scenarios, like detecting humans or obstacles in vehicular networks. In scenarios where precise statistics of the measurement noise are unavailable,…

Optimization and Control · Mathematics 2022-08-17 João Domingos , Cláudia Soares , João Xavier

The inherent complexity of biological agents often leads to motility behavior that appears to have random components. Robust stochastic inference methods are therefore required to understand and predict the motion patterns from time…

Soft Condensed Matter · Physics 2024-11-14 Jan Albrecht , Manfred Opper , Robert Großmann

In this work, we investigate the dynamics of interacting particle systems subjected to repulsive forces, such as lattices of magnetized particles. To this end, we first develop a general model capable of capturing the complete dynamical…

Applied Physics · Physics 2021-03-22 Weijian Jiao , Stefano Gonella

This article proposes a novel computational modeling approach for short-ranged molecular interactions between curved slender fibers undergoing large 3D deformations, and gives a detailed overview how it fits into the framework of existing…

Computational Engineering, Finance, and Science · Computer Science 2022-08-19 Maximilian J. Grill , Wolfgang A. Wall , Christoph Meier

Protein-peptide interactions play essential roles in many cellular processes and their structural characterization is the major focus of current experimental and theoretical research. Two decades ago, it was proposed to employ the steered…

Biomolecules · Quantitative Biology 2018-08-13 Maksim Kouza , Anirban Banerji , Andrzej Kolinski , Irina Buhimschi , Andrzej Kloczkowski

We propose a new scientific application of unsupervised learning techniques to boost our ability to search for new phenomena in data, by detecting discrepancies between two datasets. These could be, for example, a simulated standard-model…

High Energy Physics - Phenomenology · Physics 2019-04-11 Andrea De Simone , Thomas Jacques

We present a theory for analyzing residence times of single molecules in a fixed detection area of a scanning tunneling microscope (STM). The approach is developed for one-dimensional molecule diffusion and can be extended to two dimensions…

Mesoscale and Nanoscale Physics · Physics 2022-08-23 Christoph Schiel , Philipp Rahe , Philipp Maass

Highly specific spatiotemporal interactions between cognate molecular partners essentially sustain all biochemical transactions in the living matter. That such an exquisite level of accuracy may result from encountering forces solely driven…

Biological Physics · Physics 2015-06-03 Jordane Preto , Elena Floriani , Ilaria Nardecchia , Pierre Ferrier , Marco Pettini

Data with multiple functional recordings at each observational unit are increasingly common in various fields including medical imaging and environmental sciences. To conduct inference for such observations, we develop a paired two-sample…

Methodology · Statistics 2025-06-16 Colin Decker , Dehan Kong , Stanislav Volgushev

The paper investigates the role of data, hypotheses and mathematical methods that can be used in the discovery of a law y=fo(u), relating variables u and y of a physical phenomenon, making use of experimental measurements of such variables.…

Systems and Control · Electrical Eng. & Systems 2025-04-30 Mario Milanese , Carlo Novara , Michele Taragna

Synthetic dimensions, wherein dynamics occurs in a set of internal states, have found great success in recent years in exploring topological effects in cold atoms and photonics. However, the phenomena thus far explored have largely been…

Quantum Gases · Physics 2023-06-02 Tao Chen , Chenxi Huang , Ivan Velkovsky , Kaden R. A. Hazzard , Jacob P. Covey , Bryce Gadway

The aim of this review is to provide a concise overview of some of the generic approaches that have been developed to deal with the statistical description of large systems of interacting dissipative 'units'. The latter notion includes,…

Statistical Mechanics · Physics 2017-03-08 Eric Bertin

Based on previous work for the static problem, in this paper we first derive one form of dynamic finite-strain shell equations for incompressible hyperelastic materials that involve three shell constitutive relations. In order to single out…

Computational Engineering, Finance, and Science · Computer Science 2020-12-16 Xiang Yu , Yibin Fu , Hui-Hui Dai

Adhesive interactions between elastic structures such as graphene sheets, carbon nanotubes, and microtubules have been shown to exhibit hysteresis due to irrecoverable energy loss associated with bond breakage, even in static…

Biological Physics · Physics 2021-02-02 Edvin Memet , Feodor Hilitski , Zvonimir Dogic , L. Mahadevan

Experiments measuring contact formation between a probe and quencher in disordered chains provide information on the fundamental dynamical timescales relevant to protein folding, but their interpretation usually relies on simplified…

Soft Condensed Matter · Physics 2016-02-17 Gul Zerze , Jeetain Mittal , Robert B. Best

Single-molecule force spectroscopy has proven to be a powerful tool for studying the kinetic behavior of biomolecules. Through application of an external force, conformational states with small or transient populations can be stabilized,…

Consider the case that one observes a single time-series, where at each time t one observes a data record O(t) involving treatment nodes A(t), possible covariates L(t) and an outcome node Y(t). The data record at time t carries information…

Statistics Theory · Mathematics 2021-02-04 Mark J. van der Laan , Ivana Malenica
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