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In striking contrast to equilibrium systems, inertia can profoundly alter the structure of active systems. Here, we demonstrate that driven systems can exhibit effective equilibrium-like states with increasing particle inertia, despite…

Soft Condensed Matter · Physics 2023-02-23 Ahmad K. Omar , Katherine Klymko , Trevor GrandPre , Phillip L. Geissler , John F. Brady

State-of-the-art simulations of high-energy nuclear collisions rely on hybrid setups, involving in particular a pre-equilibrium stage to let the system evolve from a far-from-equilibrium initial condition towards a near-equilibrated state…

Nuclear Theory · Physics 2024-10-31 Nicolas Borghini , Renata Krupczak , Hendrik Roch

Diverse complex dynamical systems are known to exhibit abrupt regime shifts at bifurcation points of the saddle-node type. The dynamics of most of these systems, however, have a stochastic component resulting in noise driven regime shifts…

Statistical Mechanics · Physics 2013-10-29 Sayantari Ghosh , Amit Kumar Pal , Indrani Bose

Structural changes in a network representation of a system (e.g.,different experimental conditions, time evolution), can provide insight on its organization, function and on how it responds to external perturbations. The deeper…

Data Analysis, Statistics and Probability · Physics 2021-01-04 Leonardo L. Portes , Michael Small

We present determinant criteria for the preclusion of non-degenerate multiple steady states in networks of interacting species. A network is modeled as a system of ordinary differential equations in which the form of the species formation…

Dynamical Systems · Mathematics 2013-07-18 Carsten Wiuf , Elisenda Feliu

Predictive coding (PC) is an energy-based learning algorithm that performs iterative inference over network activities before updating weights. Recent work suggests that PC can converge in fewer learning steps than backpropagation thanks to…

Machine Learning · Computer Science 2024-11-12 Francesco Innocenti , El Mehdi Achour , Ryan Singh , Christopher L. Buckley

Critical transitions are the abrupt shifts between qualitatively different states of a system, and they are crucial to understanding tipping points in complex dynamical systems across ecology, climate science, and biology. Detecting these…

Machine Learning · Computer Science 2026-03-06 Swadesh Pal , Roderick Melnik

Algorithmic decision-making and similar types of artificial intelligence (AI) may lead to improvements in all sectors of society, but can also have discriminatory effects. While current non-discrimination law offers people some protection,…

Computers and Society · Computer Science 2025-09-12 Janneke Gerards , Frederik Zuiderveen Borgesius

Transition State Theory is a central cornerstone in reaction dynamics. Its key step is the identification of a dividing surface that is crossed only once by all reactive trajectories. This assumption is often badly violated, especially when…

Chemical Physics · Physics 2015-05-07 F. Revuelta , Thomas Bartsch , R. M. Benito , F. Borondo

Topological phases support edge states that can be robust to material deformations and other perturbations. While well-studied in quantum systems, topological phases have also been observed in stochastic and biochemical systems, yet it…

Statistical Mechanics · Physics 2026-04-06 Ziyin Xiong , Aleksandra Nelson , Evelyn Tang

We characterize different cell states, related to cancer and ageing phenotypes, by a measure of entropy of network ensembles, integrating gene expression values and protein interaction networks. The entropy measure estimates the parameter…

Molecular Networks · Quantitative Biology 2013-05-24 G. Menichetti , G. Bianconi , E. Giampieri , G. Castellani , D. Remondini

Microbial communities routinely have several alternative stable states observed for the same environmental parameters. Sudden and irreversible transitions between these states make external manipulation of these systems more complicated. To…

Populations and Evolution · Quantitative Biology 2018-10-12 Veronika Dubinkina , Yulia Fridman , Parth Pandey , Sergei Maslov

Continuous control of non-stationary environments is a major challenge for deep reinforcement learning algorithms. The time-dependency of the state transition dynamics aggravates the notorious stability problems of model-free deep…

Machine Learning · Computer Science 2025-11-05 Abdullah Akgül , Gulcin Baykal , Manuel Haußmann , Melih Kandemir

Time series data from real-world systems often display non-stationary behavior, indicating varying statistical characteristics over time. This inherent variability poses significant challenges in deciphering the underlying structural…

Applications · Statistics 2024-05-07 Wasim Ahmad , Maha Shadaydeh , Joachim Denzler

Remodelling is defined as an evolution of microstructure or variations in the configuration of the underlying manifold. The manner in which a biological tissue and its subsystems remodel their structure is treated in a continuum mechanical…

Tissues and Organs · Quantitative Biology 2009-11-11 K. Garikipati , J. E. Olberding , E. M. Arruda , K. Grosh , H. Narayanan , S. Calve

The energy dissipation rate in a nonequilibirum reaction system can be determined by the reaction rates in the underlying reaction network. By developing a coarse-graining process in state space and a corresponding renormalization procedure…

Statistical Mechanics · Physics 2021-03-03 Qiwei Yu , Dongliang Zhang , Yuhai Tu

In this paper, we introduce a notion of quantum discrepancy, a non-commutative version of combinatorial discrepancy which is defined for projection systems, i.e. finite sets of orthogonal projections, as non-commutative counterparts of set…

Probability · Mathematics 2020-10-16 Kasra Alishahi , Mohaddeseh Rajaee , Ali Rajaei

Eukaryotic gene regulation is based on stochastic yet controlled promoter switching, during which genes transition between transcriptionally active and inactive states. Despite the molecular complexity of this process, recent studies reveal…

Molecular Networks · Quantitative Biology 2025-07-17 Benjamin Zoller , Alexis Bénichou , Thomas Gregor , Gašper Tkačik

Learning models of dynamical systems characterized by specific stability properties is of crucial importance in applications. Existing results mainly focus on linear systems or some limited classes of nonlinear systems and stability…

Systems and Control · Electrical Eng. & Systems 2025-03-18 Matteo Scandella , Michelangelo Bin , Thomas Parisini

Quantum state discrimination is a fundamental concept in quantum information theory, which refers to a class of techniques to identify a specific quantum state through a positive operator-valued measure. In this work, we investigate how…

Quantum Physics · Physics 2025-07-09 Hyunho Cha , Jungwoo Lee