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Related papers: Satisfiability and Evolution

200 papers

In sexual populations, selection operates neither on the whole genome, which is repeatedly taken apart and reassembled by recombination, nor on individual alleles that are tightly linked to the chromosomal neighborhood. The resulting…

Populations and Evolution · Quantitative Biology 2014-03-25 Richard A. Neher , Taylor A. Kessinger , Boris I. Shraiman

The evolution of structure in biology is driven by accretion and change. Accretion brings together disparate parts to form bigger wholes. Change provides opportunities for growth and innovation. Here we review patterns and processes that…

Other Quantitative Biology · Quantitative Biology 2019-01-16 Derek Caetano-Anollés , Kelsey Caetano-Anollés , Gustavo Caetano-Anollés

We explore the relations between the Boolean Satisfiability Problem with $n$ Boolean variables and the orthogonal group $\mbox{O}(n)$. We show that all $2^n$ possible solutions induce involutions of $\mathbb{R}^n$ that lie in the compact,…

Combinatorics · Mathematics 2023-11-14 Marco Budinich

Natural phenomenon of coevolution is the reciprocally induced evolutionary change between two or more species or population. Though this biological occurrence is a natural fact, there are only few attempts to use this as a simile in…

Other Computer Science · Computer Science 2012-06-07 Siby Abraham , Sugata Sanyal , Mukund Sanglikar

We look at the evolution through rewiring of the degree distribution of a network so the number edges is constant. This is exactly equivalent to the evolution of probability distributions in models of cultural transmission with drift and…

Physics and Society · Physics 2007-05-23 T. S. Evans , A. D. K. Plato

The pursuit of highest payoffs in evolutionary social dilemmas is risky and sometimes inferior to conformity. Choosing the most common strategy within the interaction range is safer because it ensures that the payoff of an individual will…

Physics and Society · Physics 2014-12-23 Attila Szolnoki , Matjaz Perc

Whether evolution can be predicted is a key question in evolutionary biology. Here we set out to better understand the repeatability of evolution. We explored experimentally the effect of mutation supply and the strength of selective…

Populations and Evolution · Quantitative Biology 2017-09-13 Thomas van Dijk , Sungmin Hwang , Joachim Krug , J. Arjan G. M. de Visser , Mark P. Zwart

It has recently been suggested that the fundamental haploid-diploid cycle of eukaryotic sex exploits a rudimentary form of the Baldwin effect. Thereafter the other associated phenomena can be explained as evolution tuning the amount and…

Populations and Evolution · Quantitative Biology 2018-11-12 Larry Bull

Evolutionary Robotics offers the possibility to design robots to solve a specific task automatically by optimizing their morphology and control together. However, this co-optimization of body and control is challenging, because controllers…

Robotics · Computer Science 2026-01-08 K. Ege de Bruin , Kyrre Glette , Kai Olav Ellefsen

The two classic theories for the existence of sexual replication are that sex purges deleterious mutations from a population, and that sex allows a population to adapt more rapidly to changing environments. These two theories have often…

Populations and Evolution · Quantitative Biology 2008-09-02 Pavel Gorodetsky , Emmanuel Tannenbaum

Coevolutionary dynamics is investigated in chemical catalysis, biological evolution, social and economic systems. The dynamics of these systems can be analyzed within the unifying framework of evolutionary game theory. In this Letter, we…

Populations and Evolution · Quantitative Biology 2012-06-12 Jens Christian Claussen , Arne Traulsen

In subdivided populations, migration acts together with selection and genetic drift and determines their evolution. Building up on a recently proposed method, which hinges on the emergence of a time scale separation between local and global…

Populations and Evolution · Quantitative Biology 2015-03-24 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta

We analyse the statistical properties of genealogical trees in a neutral model of a closed population with sexual reproduction and non-overlapping generations. By reconstructing the genealogy of an individual from the population evolution,…

Condensed Matter · Physics 2009-10-31 Bernard Derrida , Susanna C. Manrubia , Damian H. Zanette

We consider a integro-differential nonlinear model that describes the evolution of a population structured by a quantitative trait. The interactions between traits occur from competition for resources whose concentrations depend on the…

Analysis of PDEs · Mathematics 2011-12-05 Nicolas Champagnat , Pierre-Emmanuel Jabin

Deterministic evolutionary theory robustly predicts that populations displaying altruistic behaviours will be driven to extinction by mutant cheats that absorb common benefits but do not themselves contribute. Here we show that when…

Populations and Evolution · Quantitative Biology 2016-10-03 George W. A. Constable , Tim Rogers , Alan J. McKane , Corina E. Tarnita

We study the evolution of allele frequencies in a large population where random mating is violated in a particular way that is related to recent works on speciation. Specifically, we consider non-random encounters in haploid organisms…

Populations and Evolution · Quantitative Biology 2013-09-05 David M. Schneider , Ayana B. Martins , Eduardo do Carmo , Marcus A. M. de Aguiar

We systematically study the computational complexity of a broad class of computational problems in phylogenetic reconstruction. The class contains for example the rooted triple consistency problem, forbidden subtree problems, the quartet…

Computational Complexity · Computer Science 2017-08-15 Manuel Bodirsky , Peter Jonsson , Trung Van Pham

We introduce the notion of a reproducible algorithm in the context of learning. A reproducible learning algorithm is resilient to variations in its samples -- with high probability, it returns the exact same output when run on two samples…

Machine Learning · Computer Science 2023-04-17 Russell Impagliazzo , Rex Lei , Toniann Pitassi , Jessica Sorrell

A Boolean constraint satisfaction instance is a conjunction of constraint applications, where the allowed constraints are drawn from a fixed set B of Boolean functions. We consider the problem of determining whether two given constraint…

Computational Complexity · Computer Science 2007-05-23 E. Boehler , E. Hemaspaandra , Steffen Reith , Heribert Vollmer

Evolutionary systems must learn to generalize, often extrapolating from a limited set of selective conditions to anticipate future environmental changes. The mechanisms enabling such generalization remain poorly understood, despite their…

Populations and Evolution · Quantitative Biology 2025-10-29 Federica Ferretti , Mehran Kardar , Arvind Murugan