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Propulsion of otherwise passive objects is achieved by mechanisms of active driving. We concentrate on cases in which the direction of active drive is subject to spontaneous symmetry breaking. In our case, this direction will be maintained,…

Biological Physics · Physics 2022-07-08 Andreas M. Menzel

How stochastic, microscopic events generate deterministic, macroscopic properties is a fundamental question in physics. We address this question by developing a quantum master equation model for concentrated radical solutions, where random…

Chemical Physics · Physics 2026-05-26 Yoshiaki Uchida , Ryohei Kishi

We investigate a model for the dynamics of a solid object, which moves over a randomly vibrating solid surface and is subject to a constant external force. The dry friction between the two solids is modeled phenomenologically as being…

Statistical Mechanics · Physics 2010-12-21 A. Baule , H. Touchette , E. G. D. Cohen

We consider stochastic motion of a particle on a cyclic graph with arbitrarily periodic time dependent kinetic rates. We demonstrate duality relations for statistics of currents in this model and in its continuous version of a diffusion in…

Statistical Mechanics · Physics 2015-03-19 Jie Ren , V. Y. Chernyak , N. A. Sinitsyn

Three coarse-grained models of the double-stranded DNA are proposed and compared in the context of mechanical manipulation such as twisting and various schemes of stretching. The models differ in the number of effective beads (between two…

Biomolecules · Quantitative Biology 2015-05-13 Szymon Niewieczerzał , Marek Cieplak

We apply a recently developed model of cytoskeletal force generation to study a cell intrinsic contractility, as well as its response to external loading. The model is based on a non-equilibrium thermodynamic treatment of the…

Subcellular Processes · Quantitative Biology 2015-06-19 Mirko Maraldi , Clara Valero , Krishna Garikipati

A modification of the optimal fluctuation approach is applied to study the tails of the free energy distribution function P(F) for an elastic string in quenched disorder both in the regions of the universal behavior of P(F) and in the…

Disordered Systems and Neural Networks · Physics 2009-11-13 I. V. Kolokolov , S. E. Korshunov

We study the statistical mechanics of a single active slider on a fluctuating interface, by means of numerical simulations and theoretical arguments. The slider, which moves by definition towards the interface minima, is active as it also…

Statistical Mechanics · Physics 2019-07-25 Francesco Cagnetta , Martin R. Evans , Davide Marenduzzo

Single-molecule stretching experiments are widely utilized within the fields of physics and chemistry to characterize the mechanics of individual bonds or molecules, as well as chemical reactions. Analytic relations describing these…

Statistical Mechanics · Physics 2024-01-10 Michael R. Buche , Jessica M. Rimsza

Dynamics of molecular motors that move along linear lattices and interact with them via reversible destruction of specific lattice bonds is investigated theoretically by analyzing exactly solvable discrete-state ``burnt-bridge'' models.…

Soft Condensed Matter · Physics 2009-11-13 Max N. Artyomov , Alexander Yu. Morozov , Anatoly B. Kolomeisky

Two interaction mechanisms of particles in a fluid are proposed on base of forces, mediated by hydrodynamic thermal fluctuations. The first one is similar to the conventional van der Waals interaction, but instead of been mediated by…

Soft Condensed Matter · Physics 2009-11-07 B. I. Ivlev

This article studies the fundamental problem of separating two adhesive elastic fibers based on numerical simulation employing a recently developed finite element model for molecular interactions between curved slender fibers. Specifically,…

Computational Engineering, Finance, and Science · Computer Science 2019-08-01 Maximilian J. Grill , Christoph Meier , Wolfgang A. Wall

Fractional excitations in fracton models exhibit novel features not present in conventional topological phases: their mobility is constrained, there are an infinitude of types, and they bear an exotic sense of 'braiding'. Hence, they…

Strongly Correlated Electrons · Physics 2019-10-24 Wilbur Shirley , Kevin Slagle , Xie Chen

We study a system of hard-core particles sliding downwards on a fluctuating one-dimensional surface which is characterized by a dynamical exponent $z$. In numerical simulations, an initially random particle density is found to coarsen and…

Statistical Mechanics · Physics 2009-10-31 Dibyendu Das , Mustansir Barma

Because the constant extension ensemble of single chain molecule is not always equivalent with constant force ensemble, a model of double-stranded conformations, as in RNA molecules and $\beta$-sheets in proteins, with fixed extension…

Soft Condensed Matter · Physics 2007-05-23 Fei Liu , Luru Dai , Tao Xu , Zhong-can Ou-Yang

Molecular dynamics (MD) simulations are employed to investigate the capillary fluctuations of steps on the surface of a model metal system. The fluctuation spectrum, characterized by the wave number ($k$) dependence of the mean squared…

Materials Science · Physics 2017-10-25 Rodrigo Freitas , Timofey Frolov , Mark Asta

A bonded particle model is used to explore how variations in the material properties of brittle, isotropic solids affect critical behavior in fragmentation. To control material properties, a new model is proposed which includes breakable…

Soft Condensed Matter · Physics 2023-09-14 Joel T. Clemmer , Mark O. Robbins

Although the stretching of polymers and biomolecules is important in numerous settings, their response when confined to two-dimensions is relatively poorly-studied. In this paper, we derive closed-form analytical expressions for the…

Soft Condensed Matter · Physics 2013-05-28 Sara Iliafar , Dmitri Vezenov , Anand Jagota

The ubiquitous appearance of regions of localized deformation (shear bands) in different kinds of disordered materials under shear is studied in the context of a mesoscopic model of plasticity. The model may or may not include relaxational…

Soft Condensed Matter · Physics 2015-05-19 E. A. Jagla

We address the velocity fluctuations of fastly moving cracks in stressed materials. One possible mechanism for such fluctuations is the interaction of the main crack with micro cracks (irrespective whether these are existing material…

Materials Science · Physics 2007-05-23 E. Bouchbinder , D. Kessler , I. Procaccia
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