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This article describes SimEngine, an open-source R package for structuring, maintaining, running, and debugging statistical simulations on both local and cluster-based computing environments. Several R packages exist for structuring…

Computation · Statistics 2025-09-25 Avi Kenny , Charles J. Wolock

The notion of an equational shell is studied to involve the objects and their environment. Appropriate methods are studied as valid embeddings of refined objects. The refinement process determines the linkages between the variety of…

Logic in Computer Science · Computer Science 2007-05-23 Larissa Ismailova

The Visual Physics Analysis (VISPA) project integrates different aspects of physics analyses into a graphical development environment. It addresses the typical development cycle of (re-)designing, executing and verifying an analysis. The…

Data Analysis, Statistics and Probability · Physics 2012-09-10 H. -P. Bretz , M. Brodski , M. Erdmann , R. Fischer , A. Hinzmann , T. Klimkovich , D. Klingebiel , M. Komm , J. Lingemann , G. Müller , T. Münzer , M. Rieger , J. Steggemann , T. Winchen

In the context of regression with a large number of explanatory variables, Cox and Battey (2017) emphasize that if there are alternative reasonable explanations of the data that are statistically indistinguishable, one should aim to specify…

Computation · Statistics 2019-03-15 Henrique Helfer Hoeltgebaum , Heather Battey

The dirichletprocess package provides software for creating flexible Dirichlet process objects. Users can perform nonparametric Bayesian analysis using Dirichlet processes without the need to program their own inference algorithms. Instead,…

Computation · Statistics 2026-05-05 Gordon J. Ross , Dean Markwick , Priyanshu Tiwari

In the package corr2D two-dimensional correlation analysis is implemented in R. This paper describes how two-dimensional correlation analysis is done in the package and how the mathematical equations are translated into R code. The paper…

Computation · Statistics 2022-01-11 Robert Geitner , Robby Fritzsch , Jürgen Popp , Thomas W. Bocklitz

This paper presents an R package to handle and represent measurements with errors in a very simple way. We briefly introduce the main concepts of metrology and propagation of uncertainty, and discuss related R packages. Building upon this,…

Computation · Statistics 2019-08-02 Iñaki Ucar , Edzer Pebesma , Arturo Azcorra

Organizations that develop software have recognized that software process models are particularly useful for maintaining a high standard of quality. In the last decade, simulations of software processes were used in several settings and…

Software Engineering · Computer Science 2014-02-24 Holger Neu , Thomas Hanne , Jürgen Münch , Stefan Nickel , Andreas Wirsen

Multivariate spatio-temporal data refers to multiple measurements taken across space and time. For many analyses, spatial and time components can be separately studied: for example, to explore the temporal trend of one variable for a single…

Computation · Statistics 2026-02-24 H. Sherry Zhang , Dianne Cook , Ursula Laa , Nicolas Langrené , Patricia Menéndez

This exposition presents nimblewomble, a software package to perform wombling, or boundary analysis, using the nimble Bayesian hierarchical modeling language in the R statistical computing environment. Wombling is used widely to track…

Computation · Statistics 2025-04-11 Aritra Halder , Sudipto Banerjee

To harness the full benefit of new computing platforms, it is necessary to develop software with parallel computing capabilities. This is no less true for statisticians than for astrophysicists. The R programming language, which is perhaps…

Computation · Statistics 2017-09-08 George Ostrouchov , Wei-Chen Chen , Drew Schmidt

Bachelor physics lectures on particle physics and astrophysics were complemented by exercises related to data analysis and data interpretation at the RWTH Aachen University recently. The students performed these exercises using the internet…

I present an R package called edibble that facilitates the design of experiments by encapsulating elements of the experiment in a series of composable functions. This package is an interpretation of "the grammar of experimental designs" by…

Computation · Statistics 2023-11-17 Emi Tanaka

Multiplicative mixed models can be applied in a wide range of scientific disciplines, since they are relevant in every situation where an interaction between a fixed effect and a random effect is present. Until now, no R package has been…

Computation · Statistics 2018-11-05 Sofie Pødenphant , Kasper Kristensen , Per B. Brockhoff

The use of statistical software in academia and enterprises has been evolving over the last years. More often than not, students, professors, workers, and users, in general, have all had, at some point, exposure to statistical software.…

Applications · Statistics 2019-08-21 Rui Portocarrero Sarmento , Vera Costa

The causalimages R package enables causal inference with image and image sequence data, providing new tools for integrating novel data sources like satellite and bio-medical imagery into the study of cause and effect. One set of functions…

Machine Learning · Computer Science 2023-11-13 Connor T. Jerzak , Adel Daoud

Context: Software testing plays an essential role in product quality improvement. For this reason, several software testing models have been developed to support organizations. However, adoption of testing process models inside…

Software Engineering · Computer Science 2019-01-08 Katarína Hrabovská , Bruno Rossi , Tomáš Pitner

The increasingly sophisticated environment in which attackers operate makes software security an even greater challenge in open-source projects, where malicious packages are prevalent. Static analysis tools, such as Malcontent, are highly…

Cryptography and Security · Computer Science 2026-01-27 Duc-Ly Vu , Thanh-Cong Nguyen , Minh-Khanh Vu , Ngoc-Thanh Nguyen , Kim-Anh Do Thi

We review various changes made in recent years to the software development process of the LAMMPS simulation software package and the software itself. We discuss how those changes have impacted the effort and workflow required to develop and…

Software Engineering · Computer Science 2025-05-13 Axel Kohlmeyer , Richard Berger

The capability of R to do symbolic mathematics is enhanced by the caracas package. This package uses the Python computer algebra library SymPy as a back-end but caracas is tightly integrated in the R environment. This enables the R user…

Applications · Statistics 2023-08-22 Mikkel Meyer Andersen , Søren Højsgaard
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