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In order to remain adaptable to a dynamic environment, neural activity must be simultaneously both sensitive and stable. To solve this problem, the brain has been hypothesised to sit near a critical boundary. Yet, precisely how criticality…

Neurons and Cognition · Quantitative Biology 2023-04-07 Brandon R. Munn , Eli J. Müller , James M. Shine

We investigate the nonlinear effect of a pendulum with the upper end fixed to an elastic rod which is only allowed to vibrate horizontally. The pendulum will start rotating and trace a delicate stationary pattern when released without…

Chaotic Dynamics · Physics 2020-07-01 J. Qiuhan , L. Yao , Z. Huijun , W. Yinlong , W. Jianguo , W. Sihui

We identify a new phenomenon in neural network optimization which arises from the interaction of depth and a particular heavy-tailed structure in natural data. Our result offers intuitive explanations for several previously reported…

Machine Learning · Computer Science 2023-11-08 Elan Rosenfeld , Andrej Risteski

We study the effects of coupling between layers of stochastic neural field models with laminar structure. In particular, we focus on how the propagation of waves of neural activity in each layer is affected by the coupling. Synaptic…

Pattern Formation and Solitons · Physics 2015-06-17 Zachary P. Kilpatrick

The author investigates the onset of patterns in vertically oscillated layers of dissipative particles using numerical solutions of continuum equations to Navier-Stokes order. Above a critical accelerational amplitude of the cell, standing…

Soft Condensed Matter · Physics 2010-03-12 J. Bougie

Feedback loops are essential for regulating cell proliferation and maintaining the delicate balance between cell division and cell death. Thanks to the exact solution of a few simple models of cell growth it is by now clear that stochastic…

Populations and Evolution · Quantitative Biology 2023-03-07 Antonio Francesco Zirattu , Marta Biondo , Matteo Osella , Michele Caselle

A variety of living and non-living systems exhibit collective motion. From swarm robotics to bacterial swarms, and tissue wound healing to human crowds, examples of collective motion are highly diverse but all of them share the common…

Biological Physics · Physics 2023-07-12 Jonathan E. Dawson , Abdul N. Malmi-Kakkada

Periodic forcing of nonlinear oscillators leads to a large number of dynamic behaviors. The coupling of the cell-cycle to the circadian clock provides a biological realization of such forcing. Using high throughput single-cell microscopy,…

Certain cellular processes take the form of activity pulses that can be interpreted in terms of noise-driven excitable dynamics. Here we present an overview of different gene circuit architectures that exhibit excitable pulses of protein…

Molecular Networks · Quantitative Biology 2011-04-22 Pau Rué , Jordi Garcia-Ojalvo

We describe a simple conductance-based model neuron that includes intra- and extra-cellular ion concentration dynamics and show that this model exhibits periodic bursting. The bursting arises as the fast spiking behavior of the neuron is…

Cell Behavior · Quantitative Biology 2011-09-22 Ernest Barreto , John R. Cressman

Propagation of oscillatory signals through the cortex and coherence is shaped by the connectivity structure of neuronal circuits. This study systematically investigates the network and stimulus properties that shape network responses. The…

Neurons and Cognition · Quantitative Biology 2017-04-28 Hannah Bos , Jannis Schücker , Moritz Helias

Microtubules are highly regulated dynamic elements of the cytoskeleton of eukaryotic cells. One of the regulation mechanisms observed in living cells is the severing by the proteins katanin and spastin. We introduce a model for the dynamics…

Subcellular Processes · Quantitative Biology 2010-03-12 Simon H. Tindemans , Bela M. Mulder

We investigate the dynamics of a nonlinear model for tumor growth within a cellular medium. In this setting the "tumor" is viewed as a multiphase flow consisting of cancerous cells in either proliferating phase or quiescent phase and a…

Analysis of PDEs · Mathematics 2015-03-31 Donatella Donatelli , Konstantina Trivisa

We consider a system consisting of two delay differential equations with a large parameter, modeling the association of a pair of neurooscillators. The unknown functions describe the changes in the normalized membrane potentials of neurons…

Exactly Solvable and Integrable Systems · Physics 2024-07-15 Margarita Preobrazhenskaia , Vera Zelenova

We study the dynamics of proliferating cell collectives whose microscopic constituents' growth is inhibited by macroscopic growth-induced stress. Discrete particle simulations of a growing collective show the emergence of concentric-ring…

Biological Physics · Physics 2024-05-17 Scott Weady , Bryce Palmer , Adam Lamson , Taeyoon Kim , Reza Farhadifar , Michael J. Shelley

The theta rhythm is important for many cognitive functions including spatial processing, memory encoding, and memory recall. The information processing underlying these functions is thought to rely on consistent, phase-specific spiking…

Neurons and Cognition · Quantitative Biology 2025-10-16 Oleg Makarenkov , Marianne Bezaire , Michael Hasselmo

We discuss the possibility of sterile neutrinos taking shortcuts in extra dimensions, and the consequences for neutrino oscillations. This effect influences the active-sterile neutrino mixing and provides a possibility to accommodate the…

High Energy Physics - Phenomenology · Physics 2008-11-26 Heinrich Päs , Sandip Pakvasa , Thomas J. Weiler

Neurons in the visual cortex are correlated in their variability. The presence of correlation impacts cortical processing because noise cannot be averaged out over many neurons. In an effort to understand the functional purpose of…

Machine Learning · Computer Science 2018-04-04 Shamak Dutta , Bryan Tripp , Graham Taylor

Axons are linear processes of nerve cells that can range from a few tens of micrometers up to meters in length. In addition to external cues, the length of an axon is also regulated by unknown internal mechanisms. Molecular motors have been…

Subcellular Processes · Quantitative Biology 2019-05-15 Frederic Folz , Lukas Wettmann , Giovanna Morigi , Karsten Kruse

The biological effects of electromagnetic fields on proteins remain controversial beyond well-established thermal mechanisms, particularly with respect to frequency-dependent responses. Here, we propose that electromagnetic waves can…

Chemical Physics · Physics 2026-02-02 Jiafei Chen , Yuanyuan Feng , Jingzhi Feng , Xinyun Zhang , Jinzhen Zhu , Qingmeng Xu
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