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Related papers: SBML for optimizing decision support's tools

200 papers

There are many normative and technical questions involved in evaluating the quality of software used in epidemiological simulations. In this paper we answer some of these questions and offer practical guidance to practitioners, funders,…

Computers and Society · Computer Science 2020-09-22 Jack K. Horner , John F. Symons

We present BEEP (Biomedical Evidence-Enhanced Predictions), a novel approach for clinical outcome prediction that retrieves patient-specific medical literature and incorporates it into predictive models. Based on each individual patient's…

Computation and Language · Computer Science 2022-11-17 Aakanksha Naik , Sravanthi Parasa , Sergey Feldman , Lucy Lu Wang , Tom Hope

Optimization models developed by operations research (OR) experts are often deployed as decision-support systems in industrial settings. However, real-world environments are dynamic, with evolving business rules and unforeseen…

Artificial Intelligence · Computer Science 2026-05-28 Tinghan Ye , Arnaud Deza , Ved Mohan , El Mehdi Er Raqabi , Pascal Van Hentenryck

Large language models (LLMs) are increasingly used to simulate human behavior, but common practices to use LLM-generated data are inefficient. Treating an LLM's output ("model choice") as a single data point underutilizes the information…

Artificial Intelligence · Computer Science 2025-12-30 Hongshen Sun , Juanjuan Zhang

End-to-end Spoken Language Models (SLMs) hold great potential for paralinguistic perception, and numerous studies have aimed to enhance their capabilities, particularly for empathetic dialogue. However, current approaches largely depend on…

Computation and Language · Computer Science 2026-01-27 Yuhang Jia , Pei Liu , Haoqin Sun , Jiaming Zhou , Xuxin Cheng , Cao Liu , Ke Zeng , Xunliang Cai , Yong Qin

Large Language Models (LLMs) have recently garnered significant attention, primarily for their capabilities in text-based interactions. However, natural human interaction often relies on speech, necessitating a shift towards voice-based…

Computation and Language · Computer Science 2025-08-08 Wenqian Cui , Dianzhi Yu , Xiaoqi Jiao , Ziqiao Meng , Guangyan Zhang , Qichao Wang , Yiwen Guo , Irwin King

The creation of Business Process Model and Notation (BPMN) models is a complex and time-consuming task requiring both domain knowledge and proficiency in modeling conventions. Recent advances in large language models (LLMs) have…

Software Engineering · Computer Science 2026-01-30 Chantale Lauer , Peter Pfeiffer , Alexander Rombach , Nijat Mehdiyev

Clinical decision-making is a dynamic, interactive, and cyclic process where doctors have to repeatedly decide on which clinical action to perform and consider newly uncovered information for diagnosis and treatment. Large Language Models…

Computation and Language · Computer Science 2026-03-03 David Bani-Harouni , Chantal Pellegrini , Ege Özsoy , Nassir Navab , Matthias Keicher

Contextualized word embeddings derived from pre-trained language models (LMs) show significant improvements on downstream NLP tasks. Pre-training on domain-specific corpora, such as biomedical articles, further improves their performance.…

Computation and Language · Computer Science 2019-04-05 Qiao Jin , Bhuwan Dhingra , William W. Cohen , Xinghua Lu

Recent advances in natural language processing (NLP) owe their success to pre-training language models on large amounts of unstructured data. Still, there is an increasing effort to combine the unstructured nature of LMs with structured…

Computation and Language · Computer Science 2023-12-22 Juraj Vladika , Alexander Fichtl , Florian Matthes

Modeling & Simulation (M&S) approaches such as agent-based models hold significant potential to support decision-making activities in health, with recent examples including the adoption of vaccines, and a vast literature on healthy eating…

Artificial Intelligence · Computer Science 2025-09-08 Philippe J. Giabbanelli , Ameeta Agrawal

Large language models (LLMs) have shown their potential in biomedical fields. However, how the public uses them for healthcare purposes such as medical Q\&A, self-diagnosis, and daily healthcare information seeking is under-investigated.…

Computers and Society · Computer Science 2024-09-13 Yunpeng Xiao , Kyrie Zhixuan Zhou , Yueqing Liang , Kai Shu

Safe and reliable natural language inference is critical for extracting insights from clinical trial reports but poses challenges due to biases in large pre-trained language models. This paper presents a novel data augmentation technique to…

Computation and Language · Computer Science 2024-04-16 Yuqi Wang , Zeqiang Wang , Wei Wang , Qi Chen , Kaizhu Huang , Anh Nguyen , Suparna De

Recent advances in decision-making policies have led to significant progress in fields such as autonomous driving and robotics. However, testing these policies remains crucial with the existence of critical scenarios that may threaten their…

Machine Learning · Computer Science 2024-12-17 Weichao Xu , Huaxin Pei , Jingxuan Yang , Yuchen Shi , Yi Zhang , Qianchuan Zhao

Estimating model parameters is a crucial step in mathematical modelling and typically involves minimizing the disagreement between model predictions and experimental data. This calibration data can change throughout a study, particularly if…

Quantitative Methods · Quantitative Biology 2023-11-03 Tyler Cassidy

Numerous previous studies have sought to determine to what extent language models, pretrained on natural language text, can serve as useful models of human cognition. In this paper, we are interested in the opposite question: whether we can…

Computation and Language · Computer Science 2024-10-18 Samuel Kiegeland , Ethan Gotlieb Wilcox , Afra Amini , David Robert Reich , Ryan Cotterell

Accurate and interpretable diagnostic models are crucial in the safety-critical field of medicine. We investigate the interpretability of our proposed biomarker-based lung ultrasound diagnostic pipeline to enhance clinicians' diagnostic…

Knowledge-enhanced language models (KELMs) have emerged as promising tools to bridge the gap between large-scale language models and domain-specific knowledge. KELMs can achieve higher factual accuracy and mitigate hallucinations by…

Computation and Language · Computer Science 2024-11-26 Alexander Fichtl , Juraj Vladika , Georg Groh

Since infectious pathogens start spreading into a susceptible population, mathematical models can provide policy makers with reliable forecasts and scenario analyses, which can be concretely implemented or solely consulted. In these complex…

Numerical Analysis · Mathematics 2024-04-30 Giovanni Ziarelli , Nicola Parolini , Marco Verani

The biomedical domain has sparked a significant interest in the field of Natural Language Processing (NLP), which has seen substantial advancements with pre-trained language models (PLMs). However, comparing these models has proven…