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Network alignment (NA) is the task of discovering node correspondences across different networks. Although NA methods have achieved remarkable success in a myriad of scenarios, their satisfactory performance is not without prior anchor link…

Social and Information Networks · Computer Science 2022-08-25 Jin-Duk Park , Cong Tran , Won-Yong Shin , Xin Cao

Sequence comparison and alignment has had an enormous impact on our understanding of evolution, biology, and disease. Comparison and alignment of biological networks will likely have a similar impact. Existing network alignments use…

Molecular Networks · Quantitative Biology 2009-10-08 Oleksii Kuchaiev , Tijana Milenkovic , Vesna Memisevic , Wayne Hayes , Natasa Przulj

Complex networks are frequently employed to model physical or virtual complex systems. When certain entities exist across multiple systems simultaneously, unveiling their corresponding relationships across the networks becomes crucial. This…

Physics and Society · Physics 2025-04-16 Rui Tang , Ziyun Yong , Shuyu Jiang , Xingshu Chen , Yaofang Liu , Yi-Cheng Zhang , Gui-Quan Sun , Wei Wang

Network alignment, the process of finding correspondences between nodes in different graphs, has many scientific and industrial applications. Existing unsupervised network alignment methods find suboptimal alignments that break up node…

Social and Information Networks · Computer Science 2020-08-19 Xiyuan Chen , Mark Heimann , Fatemeh Vahedian , Danai Koutra

Biological network alignment (NA) aims to find a node mapping between species' molecular networks that uncovers similar network regions, thus allowing for transfer of functional knowledge between the aligned nodes. However, current NA…

Molecular Networks · Quantitative Biology 2020-09-09 Shawn Gu , Tijana Milenkovic

A Multilayer Network (MN) is a system consisting of several topological levels (i.e., layers) representing the interactions between the system's objects and the related interdependency. Therefore, it may be represented as a set of layers…

Social and Information Networks · Computer Science 2023-09-15 Marianna Milano , Pietro Cinaglia , Pietro Hiram Guzzi , Mario Cannataro

Self-attention mechanism in graph neural networks (GNNs) led to state-of-the-art performance on many graph representation learning tasks. Currently, at every layer, attention is computed between connected pairs of nodes and depends solely…

Machine Learning · Computer Science 2021-08-27 Guangtao Wang , Rex Ying , Jing Huang , Jure Leskovec

Sequence alignment is common nowadays as it is used in many fields to determine how closely two sequences are related and at times to see how little they differ. In computational biology / Bioinformatics, there are many algorithms developed…

Information Theory · Computer Science 2023-05-02 Bharath Reddy , Richard Fields

Protein-protein interaction (PPI) network alignment is a canonical operation to transfer biological knowledge among species. The alignment of PPI-networks has many applications, such as the prediction of protein function, detection of…

Molecular Networks · Quantitative Biology 2019-05-15 Ehsan Kazemi , Matthias Grossglauser

We propose the Margin Adaptation for Generative Adversarial Networks (MAGANs) algorithm, a novel training procedure for GANs to improve stability and performance by using an adaptive hinge loss function. We estimate the appropriate hinge…

Machine Learning · Computer Science 2017-05-24 Ruohan Wang , Antoine Cully , Hyung Jin Chang , Yiannis Demiris

A genetic algorithm (GA) is a search method that optimises a population of solutions by simulating natural evolution. Good solutions reproduce together to create better candidates. The standard GA assumes that any two solutions can mate.…

Neural and Evolutionary Computing · Computer Science 2021-04-12 Aymeric Vie

Network alignment (NA) is the task of discovering node correspondences across multiple networks. Although NA methods have achieved remarkable success in a myriad of scenarios, their effectiveness is not without additional information such…

Social and Information Networks · Computer Science 2024-09-20 Jin-Duk Park , Cong Tran , Won-Yong Shin , Xin Cao

Over the past decade, Wireless Mesh Networks (WMNs) have seen significant advancements due to their simple deployment, cost-effectiveness, ease of implementation and reliable service coverage. However, despite these advantages, the…

Networking and Internet Architecture · Computer Science 2024-12-31 N. Ussipov , S. Akhtanov , D. Turlykozhayeva , S. Temesheva , A. Akhmetali , M. Zaidyn , T. Namazbayev , A. Bolysbay , A. Akniyazova , Xiao Tang

With generative models becoming increasingly sophisticated and diverse, detecting AI-generated images has become increasingly challenging. While existing AI-genereted Image detectors achieve promising performance on in-distribution…

Computer Vision and Pattern Recognition · Computer Science 2026-01-26 Haozhen Yan , Yan Hong , Suning Lang , Jiahui Zhan , Yikun Ji , Yujie Gao , Huijia Zhu , Jun Lan , Jianfu Zhang

Gravitational-wave detection strategies are based on a signal analysis technique known as matched filtering. Despite the success of matched filtering, due to its computational cost, there has been recent interest in developing deep…

General Relativity and Quantum Cosmology · Physics 2022-11-03 Dwyer S. Deighan , Scott E. Field , Collin D. Capano , Gaurav Khanna

Network alignment is a problem of finding the node mapping between similar networks. It links the data from separate sources and is widely studied in bioinformation and social network fields. The critical difference between network…

Social and Information Networks · Computer Science 2021-07-26 Hailong Li , Naiyue Chen

Social network alignment, aligning different social networks on their common users, is receiving dramatic attention from both academic and industry. All existing studies consider the social network to be static and neglect its inherent…

Social and Information Networks · Computer Science 2019-11-04 Li Sun , Zhongbao Zhang , Pengxin Ji , Jian Wen , Sen Su , Philip S. Yu

Aligning protein interaction networks (PPI) of two or more organisms consists of finding a mapping of the nodes (proteins) of the networks that captures important structural and functional associations (similarity). It is a well studied but…

Molecular Networks · Quantitative Biology 2020-10-12 Concettina Guerra , Pietro Hiram Guzzi

DNA sequence alignment is important today as it is usually the first step in finding gene mutation, evolutionary similarities, protein structure, drug development and cancer treatment. Covid-19 is one recent example. There are many…

Genomics · Quantitative Biology 2023-06-01 Suchindra , Preetam Nagaraj

In the latest advancements in multimodal learning, effectively addressing the spatial and semantic losses of visual data after encoding remains a critical challenge. This is because the performance of large multimodal models is positively…

Computer Vision and Pattern Recognition · Computer Science 2025-07-30 Shaojun E , Yuchen Yang , Jiaheng Wu , Yan Zhang , Tiejun Zhao , Ziyan Chen