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We present the first example of a phase transition in a nonequilibrium steady-state that can be argued analytically to be first order. The system of interest is a two-species reaction-diffusion problem whose control parameter is the total…

Statistical Mechanics · Physics 2009-09-25 K. Oerding , F. van Wijland , J. -P. Leroy , H. J. Hilhorst

We explore pattern formation in an active fluid system involving two chemical species that regulate active stress: a fast-diffusing species ($A$) and a slow-diffusing species ($I$). The growth of species $A$ is modelled using a nonlinear…

Pattern Formation and Solitons · Physics 2026-05-26 Joydeep Das , Abhishek Chaudhuri , Sudeshna Sinha

A model of pattern formation in living systems is presented. The pattern is achieved by the sequential interaction of two signaling pathways. The coupling of the pattern to the (thick) epithelial sheet changes is given, when the Gauss…

Tissues and Organs · Quantitative Biology 2009-05-11 Frederick W. Cummings

We develop numerical methods for reaction-diffusion systems based on the equations of fluctuating hydrodynamics (FHD). While the FHD formulation is formally described by stochastic partial differential equations (SPDEs), it becomes similar…

Fluid Dynamics · Physics 2018-01-17 Changho Kim , Andy Nonaka , John B. Bell , Alejandro L. Garcia , Aleksandar Donev

Diffusion and flow matching models generate high-fidelity data by simulating paths defined by Ordinary or Stochastic Differential Equations (ODEs/SDEs), starting from a tractable prior distribution. The probability flow ODE formulation…

Computer Vision and Pattern Recognition · Computer Science 2026-03-19 Liangyu Yuan , Ruoyu Wang , Tong Zhao , Dingwen Fu , Mingkun Lei , Beier Zhu , Chi Zhang

A feature common to many models of vegetation pattern formation in semi-arid ecosystems is a sequence of qualitatively different patterned states, "gaps -> labyrinth -> spots", that occurs as a parameter representing precipitation…

Pattern Formation and Solitons · Physics 2014-10-10 Karna Gowda , Hermann Riecke , Mary Silber

We obtain classification, solvability and nonexistence theorems for positive stationary states of reaction-diffusion and Schr\"odinger systems involving a balance between repulsive and attractive terms. This class of systems contains PDE…

Analysis of PDEs · Mathematics 2015-10-01 Alexandre Montaru , Boyan Sirakov

The diffusion equation is extended by including spatial-temporal memory in such a manner that the conservation of the concentration is maintained. The additional memory term gives rise to the formation of non-trivial stationary solutions.…

Statistical Mechanics · Physics 2009-11-10 Steffen Trimper , Knud Zabrocki

The emergence of stable disordered patterns in reactive system on spatially homogenous substrate is studied in the context of vegetation patterns in the semi-arid climatic zone. It is shown that reaction-diffusion systems that allow for…

Pattern Formation and Solitons · Physics 2009-11-11 Alon Manor , Nadav M. Shnerb

We propose a new non-equilibrium model for spatial pattern formation on the basis of local information transfer. Unlike standard models of pattern formation it is not based on the Turing instability. Information is transmitted through the…

Statistical Mechanics · Physics 2007-05-23 Thimo Rohlf , Stefan Bornholdt

Ordinary differential equations (ODEs) are widely used to describe dynamical systems in science, but identifying parameters that explain experimental measurements is challenging. In particular, although ODEs are differentiable and would…

Machine Learning · Computer Science 2024-07-22 Jonas Beck , Nathanael Bosch , Michael Deistler , Kyra L. Kadhim , Jakob H. Macke , Philipp Hennig , Philipp Berens

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

Dynamical Systems · Mathematics 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

In this paper, we are concerned with the state feedback stabilization of ODE-PDE cascade systems governed by a linear ordinary differential equation and the 1-d reaction-diffusion equation posed on a bounded interval. In contrast to the…

Analysis of PDEs · Mathematics 2018-01-04 Habib Ayadi

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

Analysis of PDEs · Mathematics 2013-12-19 Masoud Yari

The aim of this work is to study the effect of diffusion on the stability of the equilibria in a general two-components reaction-diffusion system with Neumann boundary conditions in the space of continuous functions. As by product, we…

Analysis of PDEs · Mathematics 2023-12-19 Francisco J. Vielma-Leal , Miguel A. D. R. Palma , Miguel Montenegro-Concha

Reaction-diffusion processes across layered media arise in several scientific domains such as pattern-forming E. coli on agar substrates, epidermal-mesenchymal coupling in development, and symmetry-breaking in cell polarisation. We develop…

Pattern Formation and Solitons · Physics 2020-09-18 Andrew L. Krause , Václav Klika , Jacob Halatek , Paul K. Grant , Thomas E. Woolley , Neil Dalchau , Eamonn A. Gaffney

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

Turing (or double-diffusive) instabilities describe pattern formation in reaction-diffusion systems, and were proposed in 1952 as a potential mechanism behind pattern formation in nature, such as leopard spots and zebra stripes. Because the…

Materials Science · Physics 2020-04-29 M. W. Noble , M. R. Tonks , S. P. Fitzgerald

In this article we present a computational framework for isolating spatial patterns arising in the steady states of reaction-diffusion systems. Such systems have been used to model many different phenomena in areas such as developmental and…

Numerical Analysis · Mathematics 2016-04-20 Laura Murphy , Chandrasekhar Venkataraman , Anotida Madzvamuse

Diffusion plays an important role in a wide variety of phenomena, from bacterial quorum sensing to the dynamics of traffic flow. While it generally tends to level out gradients and inhomogeneities, diffusion has nonetheless been shown to…

Pattern Formation and Solitons · Physics 2024-07-03 Alexandre Champagne-Ruel , Sascha Zakaib-Bernier , Paul Charbonneau
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