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Consider first a memoryless population model described by the usual branching process with a given mean reproduction matrix on a finite space of types. Motivated by the consequences of atavism in Evolutionary Biology, we are interested in a…

Probability · Mathematics 2025-01-03 Jean Bertoin

The hypothesis considered here is that cognition is based on a small set of systems-level computational primitives that are defined at a level higher than single neurons. It is pointed out that for one such set of primitives, whose…

Neurons and Cognition · Quantitative Biology 2018-07-30 Leslie Valiant

We report a bistable organic memory made of a single organic layer embedded between two electrodes, we compare to the organic/metal nanoparticle/organic tri-layers device [L.P. Ma, J. Liu, and Y. Yang, Appl. Phys. Lett. 80, 2997 (2002)]. We…

Materials Science · Physics 2015-06-24 Dominique Vuillaume , Kamal Lmimouni , Denis Tondelier , Christophe Fery , Gunther Haas

Inspired by the cognitive science theory, we explicitly model an agent with both semantic and episodic memory systems, and show that it is better than having just one of the two memory systems. In order to show this, we have designed and…

Artificial Intelligence · Computer Science 2026-05-19 Taewoon Kim , Michael Cochez , Vincent Francois-Lavet , Mark Neerincx , Piek Vossen

Recent progress in diverse intelligence has shown simple learning capacities below the organism level - single cells and even molecular networks. However, there are still many knowledge gaps around learning capacity above the organism…

Populations and Evolution · Quantitative Biology 2026-05-29 Adrita Samanta , Hananel Hazan , Michael Levin

Biological molecular machines are enzymes that simultaneously catalyze two processes, one donating free energy and second accepting it. Recent studies show that most native protein enzymes have a rich stochastic dynamics that often…

Biological Physics · Physics 2018-12-21 Michal Kurzynski , Przemyslaw Chelminiak

Memory systems are fundamental to AI agents, yet existing work often lacks adaptability to diverse tasks and overlooks the constructive and task-oriented role of AI agent memory. Drawing from Piaget's theory of cognitive development, we…

Artificial Intelligence · Computer Science 2025-10-21 Shian Jia , Ziyang Huang , Xinbo Wang , Haofei Zhang , Mingli Song

Active networks made of biopolymers and motor proteins are valuable bioinspired systems that have been used in the last decades to study the cytoskeleton and its self-organization under mechanical stimulation. Different techniques are…

Soft Condensed Matter · Physics 2023-05-15 Vahid Nasirimarekani , Olinka Ramìrez-Soto , Stefan Karpitschka , Isabella Guido

Electroencephalogram-based brain-computer interface (BCI) has potential applications in various fields, but their development is hindered by limited data and significant cross-individual variability. Inspired by the principles of learning…

Neural and Evolutionary Computing · Computer Science 2024-09-30 Junyan Li , Bin Hu , Zhi-Hong Guan

The human brain is the most powerful and efficient machine in existence today, surpassing in many ways the capabilities of modern computers. Currently, lines of research in neuromorphic engineering are trying to develop hardware that mimics…

Neural and Evolutionary Computing · Computer Science 2022-10-06 Daniel Casanueva-Morato , Alvaro Ayuso-Martinez , Juan P. Dominguez-Morales , Angel Jimenez-Fernandez , Gabriel Jimenez-Moreno

Memory effects are ubiquitous in nature and the class of memory circuit elements - which includes memristors, memcapacitors and meminductors - shows great potential to understand and simulate the associated fundamental physical processes.…

Mesoscale and Nanoscale Physics · Physics 2012-07-04 Yuriy V. Pershin , Massimiliano Di Ventra

Studies on computational neuroscience through functional magnetic resonance imaging (fMRI) and following biological inspired system stated that human action recognition in the brain of mammalian leads two distinct pathways in the model,…

Artificial Intelligence · Computer Science 2016-02-23 Bardia Yousefi , Chu Kiong Loo

Memory is fundamental to intelligence, enabling learning, reasoning, and adaptability across biological and artificial systems. While Transformer architectures excel at sequence modeling, they face critical limitations in long-range context…

Machine Learning · Computer Science 2025-08-19 Parsa Omidi , Xingshuai Huang , Axel Laborieux , Bahareh Nikpour , Tianyu Shi , Armaghan Eshaghi

A major archetype of artificial intelligence is developing algorithms facilitating temporal efficiency and accuracy while boosting the generalization performance. Even with the latest developments in machine learning, a key limitation has…

Machine Learning · Computer Science 2022-01-31 Meric Yucel , Serdar Bagis , Ahmet Sertbas , Mehmet Sarikaya , Burak Berk Ustundag

We expose first a biological model of memory based on one hand of the mechanical oscillations of axons during action potential and on the other hand on the changes in the extra cellular matrix composition when a mechanical strain is applied…

Soft Condensed Matter · Physics 2008-09-24 N. Olivi-Tran , Sandra Kanani , Ian Robbins

Stochasticity is a key characteristic of intracellular processes such as gene regulation and chemical signalling. Therefore, characterising stochastic effects in biochemical systems is essential to understand the complex dynamics of living…

Molecular Networks · Quantitative Biology 2019-03-04 David J. Warne , Ruth E. Baker , Matthew J. Simpson

Word embeddings are a popular way to improve downstream performances in contemporary language modeling. However, the underlying geometric structure of the embedding space is not well understood. We present a series of explorations using…

Computation and Language · Computer Science 2020-09-17 Hongwei , Zhou , Oskar Elek , Pranav Anand , Angus G. Forbes

Stochastic processes underlie a vast range of natural and social phenomena. Some processes such as atomic decay feature intrinsic randomness, whereas other complex processes, e.g. traffic congestion, are effectively probabilistic because we…

We present a novel deep neural network architecture for representing robot experiences in an episodic-like memory which facilitates encoding, recalling, and predicting action experiences. Our proposed unsupervised deep episodic memory model…

Artificial Intelligence · Computer Science 2018-07-17 Jonas Rothfuss , Fabio Ferreira , Eren Erdal Aksoy , You Zhou , Tamim Asfour

We describe software and a language for quasibiological computations. Its theoretical basis is a unified theory of complex (adaptive) systems where all laws are regularities of relations between things or agents, and dynamics is made from…

Computational Physics · Physics 2007-05-23 Gerhard Mack , Jan Wuerthner
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