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We present an algorithm for computing the barcode of the image of a morphisms in persistent homology induced by an inclusion of filtered finite-dimensional chain complexes. These algorithms make use of the clearing optimization and can be…

Algebraic Topology · Mathematics 2022-01-13 Ulrich Bauer , Maximilian Schmahl

We recently introduced a notion of tilings of geometric realizations of finite relative simplicial complexes and related those tilings to the discrete Morse theory of R. Forman, especially when they have the property of being shellable, a…

Algebraic Topology · Mathematics 2021-11-30 Jean-Yves Welschinger

In this paper, we define the homological Morse numbers of a filtered cell complex in terms of relative homology of nested filtration pieces, and derive inequalities relating these numbers to the Betti tables of the multi-parameter…

Algebraic Topology · Mathematics 2023-02-01 Andrea Guidolin , Claudia Landi

Although there is no doubt that multi-parameter persistent homology is a useful tool to analyse multi-variate data, efficient ways to compute these modules are still lacking in the available topological data analysis toolboxes. Other issues…

Algebraic Topology · Mathematics 2021-04-15 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler

A central problem in topological data analysis is that of computing the homology of a given simplicial complex. Said complexes can have arbitrary large number of simplices, as can happen, for example, if the space is the Rips-Vietoris or…

Combinatorics · Mathematics 2021-11-11 Francisco Martinez-Figueroa

The long computational time and large memory requirements for computing Vietoris Rips persistent homology from point clouds remains a significant deterrent to its application to big data. This paper aims to reduce the memory footprint of…

Algebraic Topology · Mathematics 2024-12-12 Musashi Ayrton Koyama , Vanessa Robins , Katharine Turner

Compression aims to reduce the size of an input, while maintaining its relevant properties. For multi-parameter persistent homology, compression is a necessary step in any computational pipeline, since standard constructions lead to large…

Algebraic Topology · Mathematics 2022-08-17 Ulderico Fugacci , Michael Kerber , Alexander Rolle

Forman's Discrete Morse theory is studied from an algebraic viewpoint. Analogous to independent work of Emil Skoeldberg we show that this theory can be extended to chain complexes of free modules over a ring. We provide three applications…

Commutative Algebra · Mathematics 2016-09-07 Michael Joellenbeck , Volkmar Welker

We describe a new generation of algorithms capable of mapping the structure and conformations of macromolecules and their complexes from large ensembles of heterogeneous snapshots, and demonstrate the feasibility of determining both…

Biological Physics · Physics 2014-04-30 P. Schwander , R. Fung , A. Ourmazd

We solve the problem of minimizing the number of critical points among all functions on a surface within a prescribed distance {\delta} from a given input function. The result is achieved by establishing a connection between discrete Morse…

Computational Geometry · Computer Science 2015-05-07 Ulrich Bauer , Carsten Lange , Max Wardetzky

We introduce a linear dimensionality reduction technique preserving topological features via persistent homology. The method is designed to find linear projection $L$ which preserves the persistent diagram of a point cloud $\mathbb{X}$ via…

Machine Learning · Statistics 2021-06-15 Byeongsu Yu , Kisung You

This paper derives a discrete dual problem for a prototypical hybrid high-order method for convex minimization problems. The discrete primal and dual problem satisfy a weak convex duality that leads to a priori error estimates with…

Numerical Analysis · Mathematics 2026-04-10 Ngoc Tien Tran

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

We show how to construct homology bases for certain CW complexes in terms of discrete Morse theory and cellular homology. We apply this technique to study certain subcomplexes of the half cube polytope studied in previous works. This…

Geometric Topology · Mathematics 2014-10-01 R. M. Green , Jacob T. Harper

This is the first of a series of papers that develop a systematic bridge between constructions in discrete mathematics and the corresponding continuous analogs. In this paper, we establish an equivalence between Forman's discrete Morse…

Combinatorics · Mathematics 2022-02-10 Jürgen Jost , Dong Zhang

Discrete Morse theory, a cell complex-analog to smooth Morse theory, has been developed over the past few decades since its original formulation by Robin Forman in 1998. In particular, discrete gradient vector fields on simplicial complexes…

Combinatorics · Mathematics 2022-07-05 Ivan Contreras , Andrew R. Tawfeek

This paper introduces a reformulation of the classical convergence theorem for spectral sequences of filtered complexes which provides an algorithm to effectively compute the induced filtration on the total (co)homology, as soon as the…

K-Theory and Homology · Mathematics 2009-04-30 Mohamed Barakat

Persistent homology is constrained to purely topological persistence while multiscale graphs account only for geometric information. This work introduces persistent spectral theory to create a unified low-dimensional multiscale paradigm for…

Combinatorics · Mathematics 2019-12-13 Rui Wang , Duc Duy Nguyen , Guo-Wei Wei

The theory of multidimensional persistence captures the topology of a multifiltration -- a multiparameter family of increasing spaces. Multifiltrations arise naturally in the topological analysis of scientific data. In this paper, we give a…

Computational Geometry · Computer Science 2010-11-22 Gunnar Carlsson , Gurjeet Singh , Afra Zomorodian

We introduce combinatorial multivector fields, associate with them multivalued dynamics and study their topological features. Our combinatorial multivector fields generalize combinatorial vector fields of Forman. We define isolated…

Dynamical Systems · Mathematics 2016-05-24 Marian Mrozek