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The main objective of this work consists in analyzing sub-structuring method for the parallel solution of sparse linear systems with matrices arising from the discretization of partial differential equations such as finite element, finite…

Numerical Analysis · Mathematics 2021-08-31 Abal-Kassim Cheik Ahamed , Frédéric Magoulès

The study of biological systems witnessed a pervasive cross-fertilization between experimental investigation and computational methods. This gave rise to the development of new methodologies, able to tackle the complexity of biological…

Computational Engineering, Finance, and Science · Computer Science 2013-10-01 Daniela Besozzi , Giulio Caravagna , Paolo Cazzaniga , Marco Nobile , Dario Pescini , Alessandro Re

As graph analytics often involves compute-intensive operations, GPUs have been extensively used to accelerate the processing. However, in many applications such as social networks, cyber security, and fraud detection, their representative…

Data Structures and Algorithms · Computer Science 2018-06-28 Mo Sha , Yuchen Li , Bingsheng He , Kian-Lee Tan

A previous study of MD algorithms designed for GPU use is extended to cover more recent developments in GPU architecture. Algorithm modifications are described, together with extensions to more complex systems. New measurements include the…

Computational Physics · Physics 2022-04-13 D C Rapaport

Deploying large language models (LLMs) on end-user devices is gaining importance due to benefits in responsiveness, privacy, and operational cost. Yet the limited memory and compute capability of mobile and desktop GPUs make efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-07 Rongxiang Wang , Kangyuan Shu , Felix Xiaozhu Lin

The hybrid MPI+X programming paradigm, where X refers to threads or GPUs, has gained prominence in the high-performance computing arena. This corresponds to a trend of system architectures growing more heterogeneous. The current MPI…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-31 Hui Zhou , Ken Raffenetti , Yanfei Guo , Rajeev Thakur

With the rapid advancement of Artificial Intelligence, the Graphics Processing Unit (GPU) has become increasingly essential across a growing number of safety-critical application domains. Applying a GPU is indispensable for parallel…

Operating Systems · Computer Science 2026-02-25 Yuanhai Zhang , Songyang He , Ruizhe Gou , Mingyue Cui , Boyang Li , Shuai Zhao , Kai Huang

As we reach exascale, production High Performance Computing (HPC) systems are increasing in complexity. These systems now comprise multiple heterogeneous computing components (CPUs and GPUs) utilized through diverse, often vendor-specific…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Solomon Bekele , Aurelio Vivas , Thomas Applencourt , Servesh Muralidharan , Bryce Allen , Kazutomo Yoshiiinst , Swann Perarnau , Brice Videau

The advent of multi-/many-core processors in clusters advocates hybrid parallel programming, which combines Message Passing Interface (MPI) for inter-node parallelism with a shared memory model for on-node parallelism. Compared to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-15 Huan Zhou , Jose Gracia , Ralf Schneider

We describe a highly optimized implementation of MPI domain decomposition in a GPU-enabled, general-purpose molecular dynamics code, HOOMD-blue (Anderson and Glotzer, arXiv:1308.5587). Our approach is inspired by a traditional CPU-based…

Integrating renewable resources within the transmission grid at a wide scale poses significant challenges for economic dispatch as it requires analysis with more optimization parameters, constraints, and sources of uncertainty. This…

Computational Engineering, Finance, and Science · Computer Science 2023-08-17 Kasia Świrydowicz , Nicholson Koukpaizan , Tobias Ribizel , Fritz Göbel , Shrirang Abhyankar , Hartwig Anzt , Slaven Peleš

Graphics processing units (GPU) had evolved from a specialized hardware capable to render high quality graphics in games to a commodity hardware for effective processing blocks of data in a parallel schema. This evolution is particularly…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-26 Luis Cabellos

Recent progress in artificial intelligence (AI) and high-performance computing (HPC) have brought potentially game-changing opportunities in accelerating reactive flow simulations. In this study, we introduce an open-source computational…

Computational Engineering, Finance, and Science · Computer Science 2023-12-22 Runze Mao , Yingrui Wang , Min Zhang , Han Li , Jiayang Xu , Xinyu Dong , Yan Zhang , Zhi X. Chen

We develop a scalable and extendable training framework that can utilize GPUs across nodes in a cluster and accelerate the training of deep learning models based on data parallelism. Both synchronous and asynchronous training are…

Machine Learning · Computer Science 2016-05-27 He Ma , Fei Mao , Graham W. Taylor

Dynamic resource management is essential for optimizing computational efficiency in modern high-performance computing (HPC) environments, particularly as systems scale. While research has demonstrated the benefits of malleability in…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-18 Sergio Iserte , Iker Martín-Álvarez , Krzysztof Rojek , José I. Aliaga , Maribel Castillo , Weronika Folwarska , Antonio J. Peña

Message-driven executions with over-decomposition of tasks constitute an important model for parallel programming and have been demonstrated for irregular applications. Supporting efficient execution of such message-driven irregular…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-14 Vasudevan Rengasamy , Sathish Vadhiyar

A recent Graph Neural Network (GNN) approach for learning to branch has been shown to successfully reduce the running time of branch-and-bound algorithms for Mixed Integer Linear Programming (MILP). While the GNN relies on a GPU for…

Machine Learning · Computer Science 2020-10-26 Prateek Gupta , Maxime Gasse , Elias B. Khalil , M. Pawan Kumar , Andrea Lodi , Yoshua Bengio

The rise of Large Language Models (LLM) has increased the need for scalable, high-performance inference systems, yet most existing frameworks assume homogeneous, resource-rich hardware, often unrealistic in academic, or resource-constrained…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-18 Pedro Antunes , Ana Rita Ortigoso , Gabriel Vieira , Daniel Fuentes , Luís Frazão , Nuno Costa , António Pereira

Quantum computers promise exponential speed ups over classical computers for various tasks. This emerging technology is expected to have its first huge impact in High Performance Computing (HPC), as it can solve problems beyond the reach of…

Quantum Physics · Physics 2024-03-29 Arnaud Gazda , Oceane Koska