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We further develop the large $ N $ formalism presented by some of us in earlier works in order to recursively calculate the partition function of a singly pseudoknotted RNA. We demonstrate that this calculation takes time proportional to…

Soft Condensed Matter · Physics 2009-09-29 M. Pillsbury , J. A. Taylor , H. Orland , A. Zee

We exhibit a randomized algorithm which given a matrix $A\in \mathbb{C}^{n\times n}$ with $\|A\|\le 1$ and $\delta>0$, computes with high probability an invertible $V$ and diagonal $D$ such that $\|A-VDV^{-1}\|\le \delta$ using…

Numerical Analysis · Mathematics 2022-07-21 Jess Banks , Jorge Garza-Vargas , Archit Kulkarni , Nikhil Srivastava

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

Sparse polynomial interpolation, sparse linear system solving or modular rational reconstruction are fundamental problems in Computer Algebra. They come down to computing linear recurrence relations of a sequence with the Berlekamp-Massey…

Symbolic Computation · Computer Science 2021-07-07 Jérémy Berthomieu , Jean-Charles Faugère

In this paper we introduce a numerical method for nonlinear parabolic PDEs that combines operator splitting with deep learning. It divides the PDE approximation problem into a sequence of separate learning problems. Since the computational…

Numerical Analysis · Mathematics 2021-10-12 Christian Beck , Sebastian Becker , Patrick Cheridito , Arnulf Jentzen , Ariel Neufeld

First-order stochastic methods are the state-of-the-art in large-scale machine learning optimization owing to efficient per-iteration complexity. Second-order methods, while able to provide faster convergence, have been much less explored…

Machine Learning · Statistics 2017-12-01 Naman Agarwal , Brian Bullins , Elad Hazan

In this paper, we study the nonnegative matrix factorization problem under the separability assumption (that is, there exists a cone spanned by a small subset of the columns of the input nonnegative data matrix containing all columns),…

Machine Learning · Statistics 2014-04-07 Nicolas Gillis , Stephen A. Vavasis

We apply the method of spectral sequences to study classical problems in analysis. We illustrate the method by finding polynomial vector fields that commute with a given polynomial vector field and finding integrals of polynomial…

Algebraic Topology · Mathematics 2024-02-07 Larry Bates , Martin Bendersky , Richard Churchill

We study the cost of multiplication modulo triangular families of polynomials. Following previous work by Li, Moreno Maza and Schost, we propose an algorithm that relies on homotopy and fast evaluation-interpolation techniques. We obtain a…

Symbolic Computation · Computer Science 2009-01-26 Alin Bostan , Muhammad Chowdhury , Joris van der Hoeven , Eric Schost

We develop an accelerated gradient descent algorithm on the Grassmann manifold to compute the subspace spanned by a number of leading eigenvectors of a symmetric positive semi-definite matrix. This has a constant cost per iteration and a…

Optimization and Control · Mathematics 2024-06-27 Foivos Alimisis , Simon Vary , Bart Vandereycken

In numerical linear algebra, considerable effort has been devoted to obtaining faster algorithms for linear systems whose underlying matrices exhibit structural properties. A prominent success story is the method of generalized nested…

Data Structures and Algorithms · Computer Science 2023-10-26 Sally Dong , Gramoz Goranci , Lawrence Li , Sushant Sachdeva , Guanghao Ye

In this paper, we present splitting methods that are based on iterative schemes and applied to plasma simulations. The motivation arose of solving the Coulomb collisions, which are modeled by nonlinear stochastic differential equations. We…

Numerical Analysis · Mathematics 2017-06-22 Juergen Geiser

Holographic search algorithms such as direct search and simulated annealing allow high-quality holograms to be generated at the expense of long execution times. This is due to single iteration computational costs of $O(N_x N_y)$ and number…

While the SLIM approach obtained high ranking-accuracy in many experiments in the literature, it is also known for its high computational cost of learning its parameters from data. For this reason, we focus in this paper on variants of…

Information Retrieval · Computer Science 2019-05-01 Harald Steck

It was recently conjectured that every component of a discrete-time rational dynamical system is a solution to an algebraic difference equation that is linear in its highest-shift term (a quasi-linear equation). We prove that the conjecture…

Symbolic Computation · Computer Science 2024-06-18 Bertrand Teguia Tabuguia , James Worrell

A method is described which allows to evaluate efficiently a polynomial in a (possibly trivial) extension of the finite field of its coefficients. Its complexity is shown to be lower than that of standard techniques when the degree of the…

Information Theory · Computer Science 2011-02-24 Davide Schipani , Michele Elia , Joachim Rosenthal

We propose an approach to determine the continual progression of algorithmic efficiency, as an alternative to standard calculations of time complexity, likely, but not exclusively, when dealing with data structures with unknown maximum…

Computational Complexity · Computer Science 2020-12-04 Ananth Goyal

Partitioning a sequence of length $n$ into $k$ coherent segments (Seg) is one of the classic optimization problems. As long as the optimization criterion is additive, Seg can be solved exactly in $O(n^2k)$ time using a classic dynamic…

Data Structures and Algorithms · Computer Science 2019-02-06 Nikolaj Tatti

The Paterson--Stockmeyer method is an evaluation scheme for matrix polynomials with scalar coefficients that arise in many state-of-the-art algorithms based on polynomial or rational approximation, for example, those for computing…

Numerical Analysis · Mathematics 2024-12-06 Xiaobo Liu

Low rank matrix approximation is a popular topic in machine learning. In this paper, we propose a new algorithm for this topic by minimizing the least-squares estimation over the Riemannian manifold of fixed-rank matrices. The algorithm is…

Machine Learning · Computer Science 2022-02-15 Qianqian Song
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