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Reaction-diffusion systems with time-delay defined on complex networks have been studied in the framework of the emergence of Turing instabilities. The use of the Lambert W-function allowed us get explicit analytic conditions for the onset…

Statistical Mechanics · Physics 2016-08-03 Julien Petit , Malbor Asllani , Duccio Fanelli , Ben Lauwens , Timoteo Carletti

We propose a technique to detect and generate patterns in a network of locally interacting dynamical systems. Central to our approach is a novel spatial superposition logic, whose semantics is defined over the quad-tree of a partitioned…

Artificial Intelligence · Computer Science 2014-09-22 Ebru Aydin Gol , Ezio Bartocci , Calin Belta

Morphogenesis is central to biology but remains largely unexplored in chemistry. Reaction-diffusion (RD) mechanisms are, however, essential to understand how shape emerges in the living world. While numerical methods confirm the incredible…

Pattern Formation and Solitons · Physics 2014-07-17 Anton S. Zadorin , Yannick Rondelez , Jean-Christophe Galas , André Estevez-Torres

We study diffusion-driven pattern-formation in networks of networks, a class of multilayer systems, where different layers have the same topology, but different internal dynamics. Agents are assumed to disperse within a layer by undergoing…

Physics and Society · Physics 2018-03-28 Andreas Brechtel , Philipp Gramlich , Daniel Ritterskamp , Barbara Drossel , Thilo Gross

The Turing instability is a paradigmatic route to patterns formation in reaction-diffusion systems. Following a diffusion-driven instability, homogeneous fixed points can become unstable when subject to external perturbation. As a…

Pattern Formation and Solitons · Physics 2015-09-02 Joseph D. Challenger , Raffaella Burioni , Duccio Fanelli

Nonlinear instabilities are responsible for spontaneous pattern formation in a vast number of natural and engineered systems ranging from biology to galaxies build-up. We propose a new instability mechanism leading to pattern formation in…

Pattern Formation and Solitons · Physics 2016-01-20 A. M. Perego , N. Tarasov , D. V. Churkin , S. K. Turitsyn , K. Staliunas

Long after Turing's seminal Reaction-Diffusion (RD) model, the elegance of his fundamental equations alleviated much of the skepticism surrounding pattern formation. Though Turing model is a simplification and an idealization, it is one of…

Machine Learning · Computer Science 2020-12-09 Litu Rout

This paper illustrates a further application of topological data analysis to the study of self-organising models for chemical and biological systems. In particular, we investigate whether topological summaries can capture the parameter…

Quantitative Methods · Quantitative Biology 2024-10-01 Reemon Spector , Heather A. Harrington , Eamonn A. Gaffney

This paper investigates the conditions for the stability and emergence of patterns in a new three-component reaction-diffusion system. The system describes the coexistence and interaction of water reservoirs, vegetation, and bushfire…

Analysis of PDEs · Mathematics 2026-04-14 Serena Dipierro , Enrico Valdinoci

Originating from the pioneering study of Alan Turing, the bifurcation analysis predicting spatial pattern formation from a spatially uniform state for diffusing morphogens or chemical species that interact through nonlinear reactions is a…

Pattern Formation and Solitons · Physics 2023-01-18 Merlin Pelz , Michael J. Ward

The study of pattern-forming instabilities in reaction-diffusion systems on growing or otherwise time-dependent domains arises in a variety of settings, including applications in developmental biology, spatial ecology, and experimental…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder , Václav Klika , Andrew L. Krause

In this article we present a computational framework for isolating spatial patterns arising in the steady states of reaction-diffusion systems. Such systems have been used to model many different phenomena in areas such as developmental and…

Numerical Analysis · Mathematics 2016-04-20 Laura Murphy , Chandrasekhar Venkataraman , Anotida Madzvamuse

Classical models of pattern formation are based on diffusion-driven instability (DDI) of constant stationary solutions of reaction-diffusion equations, which leads to emergence of stable, regular Turing patterns formed around that…

Analysis of PDEs · Mathematics 2016-02-03 Steffen Härting , Anna Marciniak-Czochra , Izumi Takagi

We propose a kind of reaction-diffusion equations for cell differentiation, which exhibits the Turing instability. If the diffusivity of some variables is set to be infinity, we get coupled competitive reaction-diffusion equations with a…

Cell Behavior · Quantitative Biology 2015-05-13 Hidetsugu Sakaguchi

Reaction diffusion systems are often used to study pattern formation in biological systems. However, most methods for understanding their behavior are challenging and can rarely be applied to complex systems common in biological…

Analysis of PDEs · Mathematics 2013-05-24 William R. Holmes

Realistic examples of reaction-diffusion phenomena governing spatial and spatiotemporal pattern formation are rarely isolated systems, either chemically or thermodynamically. However, even formulations of `open' reaction-diffusion systems…

Pattern Formation and Solitons · Physics 2021-05-14 Andrew L. Krause , Václav Klika , Philip K. Maini , Denis Headon , Eamonn A. Gaffney

Elucidating the neurophysiological mechanisms underlying neural pattern formation remains an outstanding challenge in Computational Neuroscience. In this paper, we address the issue of understanding the emergence of neural patterns by…

Neurons and Cognition · Quantitative Biology 2024-06-04 Gregory Dumont , Carmen Oana Tarniceriu

We consider a reaction-diffusion system with discontinuous reaction terms modeled by non-ideal relays. The system is motivated by an epigenetic population model of evolution of two-phenotype bacteria which switch phenotype in response to…

Analysis of PDEs · Mathematics 2014-11-04 Pavel Gurevich , Dmitrii Rachinskii

It is well known that simple reaction-diffusion systems can display very rich pattern formation behavior. Here we have studied two examples of such systems in three dimensions. First we investigate the morphology and stability of a generic…

Statistical Mechanics · Physics 2009-11-07 Teemu Leppanen , Mikko Karttunen , Kimmo Kaski , Rafael A. Barrio , Limei Zhang

General conditions are established under which reaction-cross-diffusion systems can undergo spatiotemporal pattern-forming instabilities. Recent work has focused on designing systems theoretically and experimentally to exhibit patterns with…

Pattern Formation and Solitons · Physics 2025-08-26 Edgardo Villar-Sepúlveda , Alan R. Champneys , Andrew L. Krause