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Structural causal models postulate noisy functional relations among a set of interacting variables. The causal structure underlying each such model is naturally represented by a directed graph whose edges indicate for each variable which…

Statistics Theory · Mathematics 2022-03-15 David Strieder , Tobias Freidling , Stefan Haffner , Mathias Drton

Bidirected graphs generalize directed and undirected graphs in that edges are oriented locally at every node. The natural notion of the degree of a node that takes into account (local) orientations is that of net-degree. In this paper, we…

Combinatorics · Mathematics 2017-04-11 Laura Gellert , Raman Sanyal

In this paper, we introduce a new approach for drawing diagrams that have applications in software visualization. Our approach is to use a technique we call confluent drawing for visualizing non-planar diagrams in a planar way. This…

Computational Geometry · Computer Science 2007-05-23 Matthew Dickerson , David Eppstein , Michael T. Goodrich , Jeremy Meng

Using graphs to model irregular information domains is an effective approach to deal with some of the intricacies of contemporary (network) data. A key aspect is how the data, represented as graph signals, depend on the topology of the…

Signal Processing · Electrical Eng. & Systems 2023-05-02 Fernando J. Iglesias Garcia , Santiago Segarra , Antonio G. Marques

Graph embedding techniques are pivotal in real-world machine learning tasks that operate on graph-structured data, such as social recommendation and protein structure modeling. Embeddings are mostly performed on the node level for learning…

Machine Learning · Computer Science 2022-04-26 Nan Wang , Lu Lin , Jundong Li , Hongning Wang

Classification of high dimensional data finds wide-ranging applications. In many of these applications equipping the resulting classification with a measure of uncertainty may be as important as the classification itself. In this paper we…

Machine Learning · Computer Science 2018-02-12 Andrea L. Bertozzi , Xiyang Luo , Andrew M. Stuart , Konstantinos C. Zygalakis

Partial duality generalizes the fundamental concept of the geometric dual of an embedded graph. A partial dual is obtained by forming the geometric dual with respect to only a subset of edges. While geometric duality preserves the genus of…

Combinatorics · Mathematics 2013-11-18 Iain Moffatt

Undirected graphical models are a key component in the analysis of complex observational data in a large variety of disciplines. In many of these applications one is interested in estimating the undirected graphical model underlying a…

Applications · Statistics 2015-10-21 Jonas M. B. Haslbeck , Lourens J. Waldorp

In unsupervised learning, dimensionality reduction is an important tool for data exploration and visualization. Because these aims are typically open-ended, it can be useful to frame the problem as looking for patterns that are enriched in…

Machine Learning · Statistics 2018-11-16 Kristen Severson , Soumya Ghosh , Kenney Ng

Random hypergraphs extend the classical notion of random graphs by allowing hyperedges to join more than two vertices, making them well-suited for modeling higher-order interactions in complex systems. Despite their broad applicability,…

Probability · Mathematics 2026-04-08 Yanna J. Kraakman , Clara Stegehuis

The configuration model was originally defined for undirected networks and has recently been extended to directed networks. Many empirical networks are however neither undirected nor completely directed, but instead usually partially…

Probability · Mathematics 2015-09-30 Kristoffer Spricer , Tom Britton

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

We study bilinear embedding models for the task of multi-relational link prediction and knowledge graph completion. Bilinear models belong to the most basic models for this task, they are comparably efficient to train and use, and they can…

Machine Learning · Computer Science 2017-09-15 Yanjie Wang , Rainer Gemulla , Hui Li

In this paper, we present a simple non-parametric method for learning the structure of undirected graphs from data that drawn from an underlying unknown distribution. We propose to use Brownian distance covariance to estimate the…

Machine Learning · Statistics 2012-06-28 Ehsan Khoshgnauz

Graph embedding algorithms are used to efficiently represent (encode) a graph in a low-dimensional continuous vector space that preserves the most important properties of the graph. One aspect that is often overlooked is whether the graph…

Machine Learning · Computer Science 2020-01-31 Zekarias T. Kefato , Nasrullah Sheikh , Alberto Montresor

Graph-based modeling plays a fundamental role in many areas of computer science. In this paper, we introduce systems of graph formulas with variables for specifying graph properties; this notion generalizes the graph formulas introduced in…

Formal Languages and Automata Theory · Computer Science 2026-01-23 Frank Drewes , Berthold Hoffmann , Mark Minas

The paradigm of linear structural equation modeling readily allows one to incorporate causal feedback loops in the model specification. These appear as directed cycles in the common graphical representation of the models. However, the…

Statistics Theory · Mathematics 2025-07-16 Mathias Drton , Marina Garrote-López , Niko Nikov , Elina Robeva , Y. Samuel Wang

Random graphs offer a useful mathematical representation of a variety of real world complex networks. Exponential random graphs, for example, are particularly suited towards generating random graphs constrained to have specified statistical…

Statistical Mechanics · Physics 2026-02-09 Alessio Catanzaro , Diego Garlaschelli , Subodh P. Patil

Undirected graphical models are a widely used class of probabilistic models in machine learning that capture prior knowledge or putative pairwise interactions between variables. Those interactions are encoded in a graph for pairwise…

Statistics Theory · Mathematics 2025-03-21 Grégoire Sergeant-Perthuis , Toby St Clere Smithe , Léo Boitel

Unsupervised multimodal change detection is a practical and challenging topic that can play an important role in time-sensitive emergency applications. To address the challenge that multimodal remote sensing images cannot be directly…

Computer Vision and Pattern Recognition · Computer Science 2023-02-08 Hongruixuan Chen , Naoto Yokoya , Chen Wu , Bo Du