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Score-based generative models (SGMs) have recently shown promising results for image reconstruction on simulated positron emission tomography (PET) datasets. In this work we have developed and implemented practical methodology for 3D image…

Large high-quality medical image datasets are difficult to acquire but necessary for many deep learning applications. For positron emission tomography (PET), reconstructed image quality is limited by inherent Poisson noise. We propose a…

One of the most challenges in medical imaging is the lack of data and annotated data. It is proven that classical segmentation methods such as U-NET are useful but still limited due to the lack of annotated data. Using a weakly supervised…

Image and Video Processing · Electrical Eng. & Systems 2020-03-20 Amine Amyar , Romain Modzelewski , Pierre Vera , Vincent Morard , Su Ruan

Deep image prior (DIP) has recently attracted attention owing to its unsupervised positron emission tomography (PET) image reconstruction, which does not require any prior training dataset. In this paper, we present the first attempt to…

Medical Physics · Physics 2023-08-08 Fumio Hashimoto , Yuya Onishi , Kibo Ote , Hideaki Tashima , Taiga Yamaya

The ability to synthesise Computed Tomography images - commonly known as pseudo CT, or pCT - from MRI input data is commonly assessed using an intensity-wise similarity, such as an L2-norm between the ground truth CT and the pCT. However,…

Image and Video Processing · Electrical Eng. & Systems 2020-04-15 Kerstin Kläser , Thomas Varsavsky , Pawel Markiewicz , Tom Vercauteren , David Atkinson , Kris Thielemans , Brian Hutton , M Jorge Cardoso , Sebastien Ourselin

The Transformer-Kernel (TK) model has demonstrated strong reranking performance on the TREC Deep Learning benchmark---and can be considered to be an efficient (but slightly less effective) alternative to BERT-based ranking models. In this…

Information Retrieval · Computer Science 2020-07-22 Bhaskar Mitra , Sebastian Hofstatter , Hamed Zamani , Nick Craswell

In this paper, we explore a novel method for tomographic image reconstruction in the field of SPECT imaging. Deep Learning methodologies and more specifically deep convolutional neural networks (CNN) are employed in the new reconstruction…

Machine Learning · Computer Science 2020-10-20 Charalambos Chrysostomou , Loizos Koutsantonis , Christos Lemesios , Costas N. Papanicolas

Introduction: We describe the foundation of PETRIC, an image reconstruction challenge to minimise the computational runtime of related algorithms for Positron Emission Tomography (PET). Purpose: Although several similar challenges are…

The aim of this research is to reconstruct the 3D X-ray refractive index gradient maps by the proposed vector Radon transform and its inverse, assuming that the small-angle deviation condition is met. Theoretical analyses show that the…

Medical Physics · Physics 2023-09-20 Keliang Liao , Qili He , Panyun Li , Liang Luo , Peiping Zhu

The task of reconstructing particles from low-level detector response data to predict the set of final state particles in collision events represents a set-to-set prediction task requiring the use of multiple features and their correlations…

Combining dual-energy computed tomography (DECT) with positron emission tomography (PET) offers many potential clinical applications but typically requires expensive hardware upgrades or increases radiation doses on PET/CT scanners due to…

Medical Physics · Physics 2024-06-21 Siqi Li , Yansong Zhu , Benjamin A. Spencer , Guobao Wang

This contribution addresses the problem of image reconstruction of radioactivity distribution for which the available information arises from several classes of data, each associated with a specific combination of detections. We introduce a…

Applications · Statistics 2023-09-12 Mehdi Latif , Jérôme Idier , Thomas Carlier , Simon Stute

Reconstructing Portal Vein and Hepatic Vein trees from contrast enhanced abdominal CT scans is a prerequisite for preoperative liver surgery simulation. Existing deep learning based methods treat vascular tree reconstruction as a semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-09-21 Deepak Keshwani , Yoshiro Kitamura , Satoshi Ihara , Satoshi Iizuka , Edgar Simo-Serra

The response of adult human bone marrow stromal stem cells to surface topographies generated through femtosecond laser machining can be predicted by a deep neural network. The network is capable of predicting cell response to a…

Image and Video Processing · Electrical Eng. & Systems 2020-09-25 Benita S. Mackay , Matthew Praeger , James A. Grant-Jacob , Janos Kanczler , Robert W. Eason , Richard O. C. Oreffo , Ben Mills

We propose a transformer-based neural network architecture for multi-object 3D reconstruction from RGB videos. It relies on two alternative ways to represent its knowledge: as a global 3D grid of features and an array of view-specific 2D…

Computer Vision and Pattern Recognition · Computer Science 2022-08-29 Michał J. Tyszkiewicz , Kevis-Kokitsi Maninis , Stefan Popov , Vittorio Ferrari

Positron range (PR) limits spatial resolution and quantitative accuracy in PET imaging, particularly for high-energy positron-emitting radionuclides like 68Ga. We propose a deep learning method using 3D residual encoder-decoder…

This paper establishes a kernel-based framework for reconstructing data on manifolds, tailored to fit the dynamic-(d)MRI-data recovery problem. The proposed methodology exploits simple tangent-space geometries of manifolds in reproducing…

Machine Learning · Computer Science 2020-02-28 Gaurav N. Shetty , Konstantinos Slavakis , Ukash Nakarmi , Gesualdo Scutari , Leslie Ying

Differentiable rendering has been widely adopted in computer graphics as a powerful approach to inverse problems, enabling efficient gradient-based optimization by differentiating the image formation process with respect to millions of…

Convergence of the block iterative method in image reconstruction for positron emission tomography (PET) requires careful control of relaxation parameters, which is a challenging task. The automatic determination of relaxation parameters…

Medical Physics · Physics 2025-01-15 Kibo Ote , Fumio Hashimoto , Yuya Onishi , Yasuomi Ouchi

In the calculation of Positron Emission Tomography (PET) image reconstruction, System Response Matrix (SRM) characterizes the numerical relationship between measurement space and image space. Due to a significant amount of calculation and…

Medical Physics · Physics 2019-09-06 Zhenzhou Deng , Feifan Luo , Anyi Li , Liang Ling , Jiu Xiong , Sikang Xu , Hongsheng Deng , Xin Zhao
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