Related papers: Space Efficient Linear Time Lempel-Ziv Factorizati…

This paper gives new results for synchronization strings, a powerful combinatorial object that allows to efficiently deal with insertions and deletions in various communication settings: $\bullet$ We give a deterministic, linear time…

Given a sequence of integers, we want to find a longest increasing subsequence of the sequence. It is known that this problem can be solved in $O(n \log n)$ time and space. Our goal in this paper is to reduce the space consumption while…

This paper delves into recent hardware implementations of the Lempel-Ziv 4 (LZ4) algorithm, highlighting two key factors that limit the throughput of single-kernel compressors. Firstly, the actual parallelism exhibited in single-kernel…

LZ77-based compression schemes compress the input text by replacing factors in the text with an encoded reference to a previous occurrence formed by the couple (length, offset). For a given factor, the smallest is the offset, the smallest…

We present two variations of Duval's algorithm for computing the Lyndon factorization of a word. The first algorithm is designed for the case of small alphabets and is able to skip a significant portion of the characters of the string, for…

We study the problem of multiway number partition optimization, which has a myriad of applications in the decision, learning and optimization literature. Even though the original multiway partitioning problem is NP-hard and requires…

The suffix tree is a very important data structure in string processing, but it suffers from a huge space consumption. In large-scale applications, compressed suffix trees (CSTs) are therefore used instead. A CST consists of three…

Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…

One of the most fundamental method for comparing two given strings $A$ and $B$ is the longest common subsequence (LCS), where the task is to find (the length) of an LCS of $A$ and $B$. In this paper, we deal with the STR-IC-LCS problem…

The $k$-mappability problem has two integers parameters $m$ and $k$. For every subword of size $m$ in a text $S$, we wish to report the number of indices in $S$ in which the word occurs with at most $k$ mismatches. The problem was lately…

Sparse suffix sorting is the problem of sorting $b=o(n)$ suffixes of a string of length $n$. Efficient sparse suffix sorting algorithms have existed for more than a decade. Despite the multitude of works and their justified claims for…

We present space efficient Monte Carlo algorithms that solve Subset Sum and Knapsack instances with $n$ items using $O^*(2^{0.86n})$ time and polynomial space, where the $O^*(\cdot)$ notation suppresses factors polynomial in the input size.…

Fermat's well-known factorization algorithm is based on finding a representation of natural numbers $N$ as the difference of squares. In 1895, Lawrence generalized this idea and applied it to multiples $kN$ of the original number. A…

Lempel-Ziv is an easy-to-compute member of a wide family of so-called macro schemes; it restricts pointers to go in one direction only. Optimal bidirectional macro schemes are NP-complete to find, but they may provide much better…

Given two sets S and T, a limited-capacity many-to-many matching (LCMM) between S and T matches each element p in S (resp. T) to at least 1 and at most Cap(p) elements in T (resp. S), where the function Cap:S\cup T-> Z>0 denotes the…

As nowadays Machine Learning (ML) techniques are generating huge data collections, the problem of how to efficiently engineer their storage and operations is becoming of paramount importance. In this article we propose a new lossless…

Multiple algorithms are known for efficiently calculating the prefix probability of a string under a probabilistic context-free grammar (PCFG). Good algorithms for the problem have a runtime cubic in the length of the input string. However,…

We present simple and efficient algorithms for calculating $q$-gram frequencies on strings represented in compressed form, namely, as a straight line program (SLP). Given an SLP of size $n$ that represents string $T$, we present an $O(qn)$…

Suppose we want to seek the longest common subsequences (LCSs) of two strings as informative patterns that explain the relationship between the strings. The dynamic programming algorithm gives us a table from which all LCSs can be extracted…

The Sliding Window Lempel-Ziv (SWLZ) algorithm has been studied from various perspectives in information theory literature. In this paper, we provide a general law which defines the asymptotics of match length for stationary and ergodic…