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We study the model-checking problem for first- and monadic second-order logic on finite relational structures. The problem of verifying whether a formula of these logics is true on a given structure is considered intractable in general, but…

Bounded treewidth and Monadic Second Order (MSO) logic have proved to be key concepts in establishing fixed-parameter tractability results. Indeed, by Courcelle's Theorem we know: Any property of finite structures, which is expressible by…

Databases · Computer Science 2008-09-19 Georg Gottlob , Reinhard Pichler , Fang Wei

In recent years, there has been increasing interest in explanation methods for neural model predictions that offer precise formal guarantees. These include abductive (respectively, contrastive) methods, which aim to compute minimal subsets…

Machine Learning · Computer Science 2023-05-03 Ouns El Harzli , Bernardo Cuenca Grau , Ian Horrocks

The decidability of equivalence for three important classes of tree transducers is discussed. Each class can be obtained as a natural restriction of deterministic macro tree transducers (MTTs): (1) no context parameters, i.e., top-down tree…

Formal Languages and Automata Theory · Computer Science 2014-05-23 Sebastian Maneth

We congratulate Lee, Nadler and Wasserman (henceforth LNW) on a very interesting paper on new methodology and supporting theory [arXiv:0707.0481]. Treelets seem to tackle two important problems of modern data analysis at once. For datasets…

Applications · Statistics 2008-07-28 Nicolai Meinshausen , Peter Bühlmann

We provide a short combinatorial proof of Cayley's formula by means of a bijective map to an outcome space of an urn-drawing problem. Furthermore we introduce an algebraic structure on the set of labeled trees, which provides a more…

Combinatorics · Mathematics 2011-02-01 Victor N. Ermolaev , Giulio Iacobelli

We study the interaction of views, queries, and background knowledge in the form of existential rules. The motivating questions concern monotonic determinacy of a query using views w.r.t. rules, which refers to the ability to recover the…

Databases · Computer Science 2024-07-23 Michael Benedikt , Stanislav Kikot , Johannes Marti , Piotr Ostropolski-Nalewaja

We prove decidability of the boundedness problem for monadic least fixed-point recursion based on positive monadic second-order (MSO) formulae over trees. Given an MSO-formula phi(X,x) that is positive in X, it is decidable whether the…

Logic in Computer Science · Computer Science 2015-07-01 Achim Blumensath , Martin Otto , Mark Weyer

This paper presents a complete axiomatization of Monadic Second-Order Logic (MSO) over infinite trees. MSO on infinite trees is a rich system, and its decidability ("Rabin's Tree Theorem") is one of the most powerful known results…

Logic in Computer Science · Computer Science 2023-06-22 Anupam Das , Colin Riba

Monadic decomposibility --- the ability to determine whether a formula in a given logical theory can be decomposed into a boolean combination of monadic formulas --- is a powerful tool for devising a decision procedure for a given logical…

Formal Languages and Automata Theory · Computer Science 2019-05-09 Pablo Barcelo , Chih-Duo Hong , Xuan-Bach Le , Anthony W. Lin , Reino Niskanen

Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…

Discrete Mathematics · Computer Science 2013-08-02 Sudheer Vakati , David Fernández-Baca

We consider the logic MSO+U, which is monadic second-order logic extended with the unbounding quantifier. The unbounding quantifier is used to say that a property of finite sets holds for sets of arbitrarily large size. We prove that the…

Logic in Computer Science · Computer Science 2015-02-18 Mikołaj Bojańczyk , Paweł Parys , Szymon Toruńczyk

A binary relation on graphs is recursively enumerable if and only if it can be computed by a formula in monadic second-order logic. The latter means that the formula defines a set of graphs, in the usual way, such that each "computation…

Formal Languages and Automata Theory · Computer Science 2020-11-25 Joost Engelfriet

Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…

Populations and Evolution · Quantitative Biology 2010-06-17 Leo van Iersel , Charles Semple , Mike Steel

We explore from an algebraic viewpoint the properties of the tree languages definable with a first-order formula involving the ancestor predicate, using the description of these languages as those recognized by iterated block products of…

Formal Languages and Automata Theory · Computer Science 2018-12-06 Martin Beaudry

Automata for unordered unranked trees are relevant for defining schemas and queries for data trees in Json or Xml format. While the existing notions are well-investigated concerning expressiveness, they all lack a proper notion of…

Formal Languages and Automata Theory · Computer Science 2014-08-27 Adrien Boiret , Vincent Hugot , Joachim Niehren , Ralf Treinen

Recent research has recognized interpretability and robustness as essential properties of trustworthy classification. Curiously, a connection between robustness and interpretability was empirically observed, but the theoretical reasoning…

Machine Learning · Computer Science 2021-02-16 Michal Moshkovitz , Yao-Yuan Yang , Kamalika Chaudhuri

The inference of new information on the relatedness of species by phylogenetic trees based on DNA data is one of the main challenges of modern biology. But despite all technological advances, DNA sequencing is still a time-consuming and…

Populations and Evolution · Quantitative Biology 2015-03-19 Mareike Fischer

One of Courcelle's celebrated results states that if C is a class of graphs of bounded tree-width, then model-checking for monadic second order logic is fixed-parameter tractable on C by linear time parameterised algorithms. An immediate…

Logic in Computer Science · Computer Science 2009-04-09 Stephan Kreutzer

Subexponential logic is a variant of linear logic with a family of exponential connectives--called subexponentials--that are indexed and arranged in a pre-order. Each subexponential has or lacks associated structural properties of weakening…

Logic in Computer Science · Computer Science 2016-02-22 Kaustuv Chaudhuri