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We construct a coarse-grained molecular dynamics model based on poly(ethylene oxide) and lithium bis-(trifluoromethane)sulfonimide salt to examine the combined effects of temperature and salt concentration on the transport properties. Salt…

Soft Condensed Matter · Physics 2023-12-27 Alexandros J. Tsamopoulos , Zhen-Gang Wang

We discuss the effects of the solvent composition on the helix-coil transition of a polypeptide chain. We use a simple model to demonstrate that improving the hydrogen-bonding ability of the solvent can make the transition less cooperative,…

Statistical Mechanics · Physics 2009-11-07 Oded Farago , Philip Pincus

Usually, the strain-induced softening behaviour observed in the differential modulus $K(T,\gamma)$ of hydrogels has been attributed to the breakage of internal structures of the network, such as the cross-links that bind together the…

Soft Condensed Matter · Physics 2025-01-07 L. K. R. Duarte , L. G. Rizzi

We demonstrate that tunable attractive (bonding) and repulsive (anti-bonding) forces can arise in highly asymmetric structures coupled to external radiation, a consequence of the bonding/anti-bonding level repulsion of guided-wave…

Recently experiments have shown very significant spin activity in biological molecules such as DNA, proteins, oligopeptides and aminoacids. Such molecules have in common their chiral structure, time reversal symmetry and the absence of…

Mesoscale and Nanoscale Physics · Physics 2020-07-29 Juan Daniel Torres , Raul Hidalgo , Solmar Varela , Ernesto Medina

We compare the spatial correlations of bond-breaking events and bond-orientational relaxation in a model two-dimensional liquid undergoing Newtonian dynamics. We find that the relaxation time of the bond-breaking correlation function is…

Statistical Mechanics · Physics 2016-08-03 Elijah Flenner , Grzegorz Szamel

The shear-jamming of dense suspensions can be strongly affected by molecular-scale interactions between particles, e.g. by chemically controlling their propensity for hydrogen bonding. However, hydrogen bonding not only enhances…

Soft Condensed Matter · Physics 2019-01-16 Nicole M. James , Chiao-Peng Hsu , Nicholas D. Spencer , Heinrich M. Jaeger , Lucio Isa

Unlike other unusual materials whose bonds contract under compression, the O:H nonbond undergoes contraction and the H-O bond elongation towards O:H and H-O length symmetry in water and ice. The energy drop of the H-O bond dictates the…

Soft Condensed Matter · Physics 2015-01-29 Chang Q Sun

Molecules with an excess number of hydrogen-bonding partners play a crucial role in fundamental chemical processes, ranging from the anomalous diffusion in supercooled water to the transport of aqueous proton defects and the ordering of…

In the physiology of oxygen-hemoglobin binding, an important role is played by the influence of $\text{H}^+$ and $\text{CO}_2$ on the affinity of hemoglobin for $\text{O}_2$. Here we extend the allosteric model of hemoglobin to include…

Biological Physics · Physics 2024-02-29 Heming Huang , Charles S. Peskin

Hydrogels have a distinct combination of mechanical and water-transport behaviors. As hydrogels stiffen, they become less permeable. Here, we combine semi-dilute polymer theory with the Kozeny-Carman equation to develop a simple scaling law…

Soft Condensed Matter · Physics 2022-09-30 Yiwei Gao , H. Jeremy Cho

The study of multi-band superconductivity is relevant for a variety of systems, from ultra cold atoms with population imbalance to particle physics, and condensed matter. As a consequence, this problem has been widely investigated bringing…

Superconductivity · Physics 2015-06-17 Mucio A. Continentino , Igor T. Padilha , Heron Caldas

The prototypical Hydrogen bond in water dimer and Hydrogen bonds in the protonated water dimer, in other small molecules, in water cyclic clusters, and in ice, covering a wide range of bond strengths, are theoretically investigated by…

Chemical Physics · Physics 2017-08-02 Pier Luigi Silvestrelli

We consider how the infrared intensity of an O-H stretch in a hydrogen bonded complex varies as the strength of the H-bond varies from weak to strong. We obtain trends for the fundamental and overtone transitions as a function of…

Chemical Physics · Physics 2017-03-30 Bijyalaxmi Athokpam , Sai G. Ramesh , Ross H. McKenzie

Density Functional Theory calculations are used to investigate the role of substrate-induced cooperative effects on the adsorption of water on a partially oxidized transition metal surface, O(2x2)/Ru(0001). Focussing particularly on the…

Materials Science · Physics 2015-05-19 Pepa Cabrera-Sanfelix , M. V. Fernández-Serra , A. Arnau , D. Sánchez-Portal

The Red cell-Hb-CSF functions as a sensor adapting response to Hb heterotropic equilibriums. At the lungs O2 and Mg2+, each one increasing affinity for the other stabilize the relax (R) form [(O2)4Hb(Mg)2].(H2O)R. At tissue level, the…

Molecular Networks · Quantitative Biology 2013-03-29 Alfred Bennun

If a deuterated molecule containing strong intramolecular hydrogen bonds is placed in a hydrogenated solvent it may preferentially exchange deuterium for hydrogen. This preference is due to the difference between the vibrational zero-point…

Chemical Physics · Physics 2015-08-07 Ross H. McKenzie , Bijyalaxmi Athokpam , Sai Ramesh

Here we demonstrate that significant progress in this area may be achieved by introducing structural elements that form hydrogen bonds with environment. Considering several examples of hybrid framework materials with different structural…

The object of this study is the kinetic process of solid-liquid first-order phase transition - melting of carbon dioxide CS-I hydrate with various cavity occupation ratios. The work was done within a framework of study on the local…

The nature of the phonon triplet in the region of OH-stretching modes in hydrogen-bonded materials is often explained by the interplay of OH-stretching modes and combinations and overtones of OH-bending modes. In order to elucidate the both…

Materials Science · Physics 2025-10-13 V. A. Abalmasov , A. S. Ivanov , R. A. Sadykov , A. V. Belushkin