Related papers: Network Reconstruction from Intrinsic Noise
Neural systems process information in a dynamical regime between silence and chaotic dynamics. This has lead to the criticality hypothesis which suggests that neural systems reach such a state by self-organizing towards the critical point…
This paper studies the problem of selecting a minimum-size set of input nodes to guarantee stability of a networked system in the presence of uncertainties and time delays. Current approaches to input selection in networked dynamical…
We study nonlinear dynamics on complex networks. Each vertex $i$ has a state $x_i$ which evolves according to a networked dynamics to a steady-state $x_i^*$. We develop fundamental tools to learn the true steady-state of a small part of the…
We study identification and inference in nonlinear dynamic systems defined on unknown interaction networks. The system evolves through an unobserved dependence matrix governing cross-sectional shock propagation via a nonlinear operator. We…
In this paper, we address the problem of dynamic network embedding, that is, representing the nodes of a dynamic network as evolving vectors within a low-dimensional space. While the field of static network embedding is wide and…
A computer model is described which is used to assess the dynamical complexity of a class of networks of spiking neurons with small-world properties. Networks are constructed by forming an initially segregated set of highly intra-connected…
In this article, we present a method to reconstruct the topology of a partially observed radial network of linear dynamical systems with bi-directional interactions. Our approach exploits the structure of the inverse power spectral density…
The well-known issue of reconstructing regulatory networks from gene expression measurements has been somewhat disrupted by the emergence and rapid development of single-cell data. Indeed, the traditional way of seeing a gene regulatory…
We consider a network of interconnected dynamical systems. Spectral network identification consists in recovering the eigenvalues of the network Laplacian from the measurements of a very limited number (possibly one) of signals. These…
Inferring networks from observed time series data presents a clear glimpse into the interconnections among nodes. Network inference models, when dealing with real-world open cases, especially in the presence of observational noise,…
In neural information processing, an input modulates neural dynamics to generate a desired output. To unravel the dynamics and underlying neural connectivity enabling such input-output association, we proposed an exactly soluble…
Neural networks have emerged as powerful tools across various applications, yet their decision-making process often remains opaque, leading to them being perceived as "black boxes." This opacity raises concerns about their interpretability…
Network-topology inference from (vertex) signal observations is a prominent problem across data-science and engineering disciplines. Most existing schemes assume that observations from all nodes are available, but in many practical…
We show that standard ResNet architectures can be made invertible, allowing the same model to be used for classification, density estimation, and generation. Typically, enforcing invertibility requires partitioning dimensions or restricting…
Intrinsic interpretability of graph neural networks (GNNs) is to find a small subset of the input graph's features -- rationale -- which guides the model prediction. Unfortunately, the leading rationalization models often rely on data…
To quantify uncertainties in inverse problems of partial differential equations (PDEs), we formulate them into statistical inference problems using Bayes' formula. Recently, well-justified infinite-dimensional Bayesian analysis methods have…
The inverse problem of supervised reconstruction of depth-variable (time-dependent) parameters in a neural ordinary differential equation (NODE) is considered, that means finding the weights of a residual network with time continuous…
We propose a new method to probe the learning mechanism of Deep Neural Networks (DNN) by perturbing the system using Noise Injection Nodes (NINs). These nodes inject uncorrelated noise via additional optimizable weights to existing…
Inferring biophysical parameters and hidden state variables from partial and noisy observations is a fundamental challenge in computational neuroscience. This problem is particularly difficult for fast - slow spiking and bursting models,…
The detection of a signal variable from multiple variables that contain many noise variables is often approached as a variable selection problem under a given objective variable. This is nothing more than building a supervised model of a…