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Ancestral state reconstruction is one of the most important tasks in evolutionary biology. Conditions under which we can reliably reconstruct the ancestral state have been studied for both discrete and continuous traits. However, the…

Populations and Evolution · Quantitative Biology 2021-11-16 Lam Si Tung Ho , Vu Dinh

We consider a population organised hierarchically with respect to size in such a way that the growth rate of each individual depends only on the presence of larger individuals. As a concrete example one might think of a forest, in which the…

Populations and Evolution · Quantitative Biology 2024-04-23 Carles Barril , Àngel Calsina , Odo Diekmann , József Z. Farkas

Rooted trees with probabilities are used to analyze properties of a variable length code. A bound is derived on the difference between the entropy rates of the code and a memoryless source. The bound is in terms of normalized informational…

Information Theory · Computer Science 2013-10-11 Georg Böcherer , Rana Ali Amjad

Conditions for the existence and uniqueness of weak solutions for a class of nonlinear nonlocal degenerate parabolic equations are established. The asymptotic behaviour of the solutions as time tends to infinity are also studied. In…

Analysis of PDEs · Mathematics 2014-07-28 Rui M. P. Almeida , Stanislav N. Antontsev , José C. M. Duque

Large time behavior of solutions to abstract differential equations is studied. The corresponding evolution problem is: $$\dot{u}=A(t)u+F(t,u)+b(t), \quad t\ge 0; \quad u(0)=u_0. \qquad (*)$$ Here $\dot{u}:=\frac {du}{dt}$, $u=u(t)\in H$,…

Dynamical Systems · Mathematics 2010-12-14 A. G. Ramm

An amoeba is a tree together with instructions how to iteratively grow trees by adding paths of a fixed length $\ell$. This paper analyses such a growth process. An amoeba is mortal if all versions of the process are finite, and it is…

Combinatorics · Mathematics 2025-04-18 Vladimir Gurvich , Matjaž Krnc , Mikhail Vyalyi

In this paper we present some basic uniqueness results for evolutive equations under density constraints. First, we develop a rigorous proof of a well-known result (among specialists) in the case where the spontaneous velocity field…

Analysis of PDEs · Mathematics 2017-04-19 Simone Di Marino , Alpár Richárd Mészáros

We study the evolution of networks when the creation and decay of links are based on the position of nodes in the network measured by their centrality. We show that the same network dynamics arises under various centrality measures, and…

Physics and Society · Physics 2013-05-29 Michael D. Koenig , Claudio J. Tessone

We consider a random walk with death in $[-N,N]$ moving in a time dependent environment. The environment is a system of particles which describes a current flux from $N$ to $-N$. Its evolution is influenced by the presence of the random…

Probability · Mathematics 2015-07-29 Anna De Masi , Errico Presutti , Dimitrios Tsagkarogiannis , Maria Eulalia Vares

In this work, we study a phase transition model in atmospheric dynamics, inspired by the works [6,14,15], which analyze the primitive equations governing the evolution of velocity, temperature, and specific humidity. The main difficulty…

Analysis of PDEs · Mathematics 2026-05-13 Giada Cianfarani Carnevale , Donatella Donatelli , Stefano Spirito

We consider a second order equation with a linear "elastic" part and a nonlinear damping term depending on a power of the norm of the velocity. We investigate the asymptotic behavior of solutions, after rescaling them suitably in order to…

Analysis of PDEs · Mathematics 2017-01-31 Marina Ghisi , Massimo Gobbino , Alain Haraux

Motivated from the study of eccentricity, center, and sum of eccentricities in graphs and trees, we introduce several new distance-based global and local functions based on the smallest distance from a vertex to some leaf (called the…

Combinatorics · Mathematics 2019-01-30 Ya-Hong Chen , Hua Wang , Xiao-Dong Zhang

The evolution of a quantity, described by a function of space and time, relates the first derivative in time of this function to a spatial operator applied to the function. The initial value of the function at time $t=0$ is given. The…

Mathematical Physics · Physics 2007-05-23 Michelle M. Wyss , Walter Wyss

Time evolution of number of species (genera, families, and others), population of them, and size distribution of present ones and life times are studied in terms of a new model, where population of each genetic taxon increases by a (random)…

Populations and Evolution · Quantitative Biology 2007-05-23 Caglar Tuncay

This paper derives a unifying theorem establishing consistency results for a broad class of tree-based algorithms. It improves current results in two aspects. First of all, it can be applied to algorithms that vary from traditional Random…

Statistics Theory · Mathematics 2024-02-22 Ricardo Blum , Munir Hiabu , Enno Mammen , Joseph T. Meyer

`Entropy' appears as driving force in many different evolution equations, both deterministic and stochastic, and in these equations this `entropy' also takes different forms. We show how all these examples can be understood as different…

Dynamical Systems · Mathematics 2026-03-10 Mark A. Peletier

In this paper, a new decay estimate for a class of stochastic evolution equations with weakly dissipative drifts is established, which directly implies the uniqueness of invariant measures for the corresponding transition semigroups.…

Probability · Mathematics 2021-05-25 Wei Liu , Jonas M. Tölle

In this paper we consider evolution equations in the abstract Hilbert space under the special conditions imposed on the operator at the right-hand side of the equation. We establish the method that allows us to formulate the existence and…

Functional Analysis · Mathematics 2022-03-15 Maksim V. Kukushkin

We study the role of phylogenetic trees on correlations in mutation processes. Generally, correlations decay exponentially with the generation number. We find that two distinct regimes of behavior exist. For mutation rates smaller than a…

Statistical Mechanics · Physics 2009-10-31 E. Ben-Naim , A. S. Lapedes

We consider a regular $n$-ary tree of height $h$, for which every vertex except the root is labelled with an independent and identically distributed continuous random variable. Taking motivation from a question in evolutionary biology, we…

Probability · Mathematics 2013-11-14 Matthew I. Roberts , Lee Zhuo Zhao