Related papers: A general method for common intervals
(Induced) Subgraph Isomorphism and Maximum Common (Induced) Subgraph are fundamental problems in graph pattern matching and similarity computation. In graphs derived from time-series data or protein structures, a natural total ordering of…
For an undirected, simple, finite, connected graph $G$, we denote by $V(G)$ and $E(G)$ the sets of its vertices and edges, respectively. A function $\varphi:E(G)\rightarrow \{1,...,t\}$ is called a proper edge $t$-coloring of a graph $G$,…
We propose a fast methodology for encoding graphs with information-theoretically minimum numbers of bits. Specifically, a graph with property pi is called a pi-graph. If pi satisfies certain properties, then an n-node m-edge pi-graph G can…
The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…
Characterizing graphs by their spectra is a fundamental and challenging problem in spectral graph theory, which has received considerable attention in recent years. A major unsolved conjecture in this area is Haemers' conjecture which…
The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…
We introduce the \emph{graphical reconfigurable circuits (GRC)} model as an abstraction for distributed graph algorithms whose communication scheme is based on local mechanisms that collectively construct long-range reconfigurable channels…
In the graph clustering problem with a planted solution, the input is a graph on $n$ vertices partitioned into $k$ clusters, and the task is to infer the clusters from graph structure. A standard assumption is that clusters induce…
Estimating the average degree of graph is a classic problem in sublinear graph algorithm. Eden, Ron, and Seshadhri (ICALP 2017, SIDMA 2019) gave a simple algorithm for this problem whose running time depended on the graph arboricity, but…
We provide a data structure for maintaining an embedding of a graph on a surface (represented combinatorially by a permutation of edges around each vertex) and computing generators of the fundamental group of the surface, in amortized time…
The problem of computing all maximal induced subgraphs of a graph G that have a graph property P, also called the maximal P-subgraphs problem, is considered. This problem is studied for hereditary, connected-hereditary and rooted-hereditary…
We show that a graph $G$ has a normal spanning tree if and only if its vertex set is the union of countably many sets each separated from any subdivided infinite clique in $G$ by a finite set of vertices. This proves a conjecture by Brochet…
In this paper we establish a bridge between Topological Data Analysis and Geometric Deep Learning, adapting the topological theory of group equivariant non-expansive operators (GENEOs) to act on the space of all graphs weighted on vertices…
Chaining algorithms aim to form a semi-global alignment of two sequences based on a set of anchoring local alignments as input. Depending on the optimization criteria and the exact definition of a chain, there are several $O(n \log n)$ time…
B$_0$-VPG graphs are intersection graphs of vertical and horizontal line segments on a plane. Cohen, Golumbic, Trotter, and Wang [Order, 2016] pose the question of characterizing B$_0$-VPG permutation graphs. We respond here by…
The treewidth of a graph is an important invariant in structural and algorithmic graph theory. This paper studies the treewidth of line graphs. We show that determining the treewidth of the line graph of a graph $G$ is equivalent to…
In online interval scheduling, the input is an online sequence of intervals, and the goal is to accept a maximum number of non-overlapping intervals. In the more general disjoint path allocation problem, the input is a sequence of requests,…
We consider the number of crossings in a random embedding of a graph, $G$, with vertices in convex position. We give explicit formulas for the mean and variance of the number of crossings as a function of various subgraph counts of $G$.…
The vertex connectivity of a graph $G$ is the size of the smallest set of vertices $S$ such that $G \setminus S$ is disconnected. For the class of planar graphs, the problem of vertex connectivity is well-studied, both from structural and…
We introduce a broad class of random graph models: the generalised hypergeometric ensemble (GHypEG). This class enables to solve some long standing problems in random graph theory. First, GHypEG provides an elegant and compact formulation…