English
Related papers

Related papers: Global SAXS data analysis for multilamellar vesicl…

200 papers

We present spectral calculations of non-LTE accretion disk models appropriate for high luminosity stellar mass black hole X-ray binary systems. We first use a dissipation profile based on scaling the results of shearing box simulations of…

High Energy Astrophysical Phenomena · Physics 2015-06-15 Ted Tao , Omer Blaes

We show that the semi-implicit time discretization approaches previously introduced for multilayer shallow water models for the barotropic case can be also applied to the variable density case with Boussinesq approximation. Furthermore,…

Numerical Analysis · Mathematics 2021-04-27 Luca Bonaventura , José Garres-Díaz

DNA methylation is a significant driver of cell-type heterogeneity and has been implicated in various regulatory processes ranging from cell differentiation to imprinting. As the methyl group is embedded in the DNA molecule, assessing DNA…

Quantitative Methods · Quantitative Biology 2023-04-13 Aleksa Krsmanovic

Mathematical models of biological populations commonly use discrete structure classes to capture trait variation among individuals (e.g. age, size, phenotype, intracellular state). Upscaling these discrete models into continuum descriptions…

Populations and Evolution · Quantitative Biology 2026-03-18 Eleonora Agostinelli , Keith L. Chambers , Helen M. Byrne , Mohit P. Dalwadi

We present a computational study of small-angle X-ray scattering (SAXS) in amorphous silicon ($a$-Si) with particular emphasis on the morphology and microstructure of voids. The relationship between the scattering intensity in SAXS and the…

Disordered Systems and Neural Networks · Physics 2018-05-23 Durga Paudel , Raymond Atta-Fynn , David A. Drabold , Stephen R. Elliott , Parthapratim Biswas

Engineering the synthetic nanopores through lipid bilayer membrane to access the interior of a cell is a long persisting challenge in biotechnology. Here, we demonstrate the stability and dynamics of a tile-based 6-helix DNA nanotube (DNT)…

Soft Condensed Matter · Physics 2017-10-18 Himanshu Joshi , Prabal K. Maiti

Using the two-dimensional nonlinear Schr\"odinger equation (NLS) as a model example, we present a general method for recovering the nonlinearity of a nonlinear dispersive equation from its small-data scattering behavior. We prove that under…

Analysis of PDEs · Mathematics 2023-05-11 Rowan Killip , Jason Murphy , Monica Visan

Multivalent interactions between deformable mesoscopic units are ubiquitous in biology, where membrane macromolecules mediate the interactions between neighbouring living cells and between cells and solid substrates. Lately, analogous…

Biological Physics · Physics 2015-04-20 S. F. Shimobayashi , B. M. Mognetti , L. Parolini , D. Orsi , P. Cicuta , L. Di Michele

The last few years have seen the development of a promising theoretical framework for statistics of the cosmic large-scale structure -- the theory of large deviations (LDT) for modelling weak-lensing one-point statistics in the mildly…

Cosmology and Nongalactic Astrophysics · Physics 2024-01-15 Alexandre Barthelemy , Anik Halder , Zhengyangguang Gong , Cora Uhlemann

Emerging coherent X-ray scattering patterns of single-particles have shown dominant morphological signatures in agreement with predictions of the scattering model used for conventional protein crystallography. The key question is if and to…

Biomolecules · Quantitative Biology 2014-07-28 Aliakbar Jafarpour

[Abridged]. We present SEDs for single-age, single-metallicity stellar populations (SSPs) covering the optical range at resolution 2.3A (FWHM). These SEDs constitute our base models, as they combine scaled-solar isochrones with MILES…

Cosmology and Nongalactic Astrophysics · Physics 2010-04-27 A. Vazdekis , P. Sánchez-Blázquez , J. Falcón-Barroso , A. J. Cenarro , M. A. Beasley , N. Cardiel , J. Gorgas , R. F. Peletier

Methanol-water liquid mixtures have been investigated by high-energy synchrotron X-ray and neutron diffraction at low temperatures. We are thus able to report the first complete sets of both X-ray and neutron weighted total scattering…

A three-dimensional model of polydisperse reactive sedimentation is developed by means of a multilayer shallow water approach. The model consists of a variety of solid particles of different sizes and densities, and substrates diluted in…

Numerical Analysis · Mathematics 2024-03-13 Julio Careaga , Víctor Osores

Recent advancements in neutron and X-ray sources, instrumentation and data collection modes have significantly increased the experimental data size (which could easily contain 10$^{8}$ -- 10$^{10}$ data points), so that conventional…

Computer Vision and Pattern Recognition · Computer Science 2018-09-25 Yawei Hui , Yaohua Liu

Supported Lipid Bilayers (SLBs) are model membranes formed at solid substrate surfaces. This architecture renders the membrane experimentally accessible to surface sensitive techniques used to study their properties, including Atomic Force…

Biological Physics · Physics 2019-11-19 James A. Goodchild , Danielle L. Walsh , Simon D. Connell

Diffusion models have emerged as a powerful class of generative models by learning to iteratively reverse the noising process. Their ability to generate high-quality samples has extended beyond high-dimensional image data to other complex…

Machine Learning · Computer Science 2025-09-03 Srinivas Anumasa , Barath Chandran. C , Tingting Chen , Dianbo Liu

The viscosity of dilute and semidilute unentangled DNA solutions, in steady simple shear flow, has been measured across a range of temperatures and concentrations. For polystyrene solutions, measurements of viscosity have been carried out…

Soft Condensed Matter · Physics 2020-07-03 Sharadwata Pan , Duc At Nguyen , B. Duenweg , P. Sunthar , T. Sridhar , J. Ravi Prakash

Bayesian density deconvolution using nonparametric prior distributions is a useful alternative to the frequentist kernel based deconvolution estimators due to its potentially wide range of applicability, straightforward uncertainty…

Statistics Theory · Mathematics 2013-09-10 Abhra Sarkar , Debdeep Pati , Bani K. Mallick , Raymond J. Carroll

The structure of model gluten protein gels prepared in ethanol/water is investigated by small angle X-ray (SAXS) and neutrons (SANS) scattering. We show that gluten gels display radically different SAXS and SANS profiles when the solvent is…

Soft Condensed Matter · Physics 2016-05-20 A Banc , C Charbonneau , M Dahesh , M-S Appavou , Z Fu , M-H Morel , L Ramos

We demonstrate the abilities of elastic x-ray scattering to yield information on dense matter with multiple ion species and on the microscopic mixing in dense materials. Based on partial structure factors from ab initio simulations, a novel…

Plasma Physics · Physics 2015-05-19 K. Wünsch , J. Vorberger , G. Gregori , D. O. Gericke