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We propose the concepts of distributed robustness and r-robustness, well adapted to functional genetics. Then we discuss the robustness of the relaxation time using a chemical reaction description of genetic and signalling networks. First,…

Molecular Networks · Quantitative Biology 2011-11-09 A. N. Gorban , O. Radulescu

Complex systems are characterized by multiple spatial and temporal scales. A natural framework to capture their multiscale nature is that of multilayer networks, where different layers represent distinct physical processes that often…

Statistical Mechanics · Physics 2024-04-29 Giorgio Nicoletti , Daniel Maria Busiello

In this paper we present a network model to study the impact of spatial distribution of constituents, coupling between them and diffusive processes in the context of biological situations. The model is in terms of network of mobile elements…

Molecular Networks · Quantitative Biology 2007-05-23 Kanchan Thadani , Ashutosh

Diffusion processes in networks are increasingly used to model the spread of information and social influence. In several applications in computational sustainability such as the spread of wildlife, infectious diseases and traffic mobility…

Social and Information Networks · Computer Science 2013-09-27 Akshat Kumar , Daniel Sheldon , Biplav Srivastava

Networks built to model real world phenomena are characeterised by some properties that have attracted the attention of the scientific community: (i) they are organised according to community structure and (ii) their structure evolves with…

Social and Information Networks · Computer Science 2019-09-04 Giulio Rossetti , Rémy Cazabet

In most social and information systems the activity of agents generates rapidly evolving time-varying networks. The temporal variation in networks' connectivity patterns and the ongoing dynamic processes are usually coupled in ways that…

Physics and Society · Physics 2014-02-18 Márton Karsai , Nicola Perra , Alessandro Vespignani

The characterization of the "most connected" nodes in static or slowly evolving complex networks has helped in understanding and predicting the behavior of social, biological, and technological networked systems, including their robustness…

Physics and Society · Physics 2010-10-21 Scott A. Hill , Dan Braha

Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…

Neurons and Cognition · Quantitative Biology 2015-06-22 Anca Radulescu , Sergio Verduzco-Flores

We introduce a model of adaptive temporal networks whose evolution is regulated by an interplay between node activity and dynamic exchange of information through links. We study the model by using a master equation approach. Starting from a…

Physics and Society · Physics 2016-04-18 Takaaki Aoki , Luis E. C. Rocha , Thilo Gross

We give a tutorial for the study of dynamical systems on networks. We focus especially on "simple" situations that are tractable analytically, because they can be very insightful and provide useful springboards for the study of more…

Adaptation and Self-Organizing Systems · Physics 2015-05-05 Mason A. Porter , James P. Gleeson

Network properties govern the rate and extent of various spreading processes, from simple contagions to complex cascades. Recently, the analysis of spreading processes has been extended from static networks to temporal networks, where nodes…

Physics and Society · Physics 2019-12-18 Eun Lee , Scott Emmons , Ryan Gibson , James Moody , Peter J. Mucha

Time-limited states characterise many dynamical processes on networks: disease infected individuals recover after some time, people forget news spreading on social networks, or passengers may not wait forever for a connection. These…

Physics and Society · Physics 2023-06-13 Arash Badie-Modiri , Márton Karsai , Mikko Kivelä

Recent empirical studies have confirmed the key roles of complex contagion mechanisms such as memory, social reinforcement, and decay effects in information diffusion and behaviour spreading. Inspired by this fact, we here propose a new…

Physics and Society · Physics 2014-08-20 Pengbi Cui , Ming Tang , Zhi-Xi Wu

Can evolving networks be inferred and modeled without directly observing their nodes and edges? In many applications, the edges of a dynamic network might not be observed, but one can observe the dynamics of stochastic cascading processes…

Machine Learning · Computer Science 2019-02-26 Elahe Ghalebi , Baharan Mirzasoleiman , Radu Grosu , Jure Leskovec

Structure of real networked systems, such as social relationship, can be modeled as temporal networks in which each edge appears only at the prescribed time. Understanding the structure of temporal networks requires quantifying the…

Physics and Society · Physics 2016-02-17 Taro Takaguchi , Yosuke Yano , Yuichi Yoshida

The dynamics of decisions in complex networks is studied within a Markov process framework using numerical simulations combined with mathematical insight into the process mechanisms. A mathematical discrete-time model is derived based on a…

Physics and Society · Physics 2012-11-01 Carlos Rodríguez Lucatero , Luis Alarcón , Roberto Bernal Jaquez , Alexander Schaum

Opinion dynamics on networks has wide applications to empirical and engineered systems and profound prospects in the general study of complex systems. Many efforts have been devoted to understanding how opinion dynamics is affected by…

Physics and Society · Physics 2019-04-12 Mingwu Li , Harry Dankowicz

Efficient networking has a substantial economic and societal impact in a broad range of areas including transportation systems, wired and wireless communications and a range of Internet applications. As transportation and communication…

Physics and Society · Physics 2015-05-30 Chi Ho Yeung , David Saad

Over the last years, a great deal of attention has been focused on complex networked systems, characterized by intricate structure and dynamics. The latter has been often represented in terms of overall statistics (e.g. average and standard…

Data Analysis, Statistics and Probability · Physics 2011-09-15 Cesar H. Comin , João B. Bunoro , Matheus P. Viana , Luciano da F. Costa

Many neural systems display cascading behavior characterized by uninterrupted sequences of neuronal firing. This gap precludes an understanding of how variations in network structure manifest in neural dynamics and either support or impinge…

Neurons and Cognition · Quantitative Biology 2019-11-12 Harang Ju , Jason Z. Kim , Danielle S. Bassett