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Simplified representations of macromolecules help in rationalising and understanding the outcome of atomistic simulations, and serve to the construction of effective, coarse-grained models. The number and distribution of coarse-grained…

Soft Condensed Matter · Physics 2021-10-27 Roberto Menichetti , Marco Giulini , Raffaello Potestio

This letter presents a theoretical and experimental study on the viability of obtaining three dimensional super-resolution (i.e. resolution overcoming the diffraction limit for all directions in space) by means of metamaterial slab lenses.…

Optics · Physics 2009-11-11 F. Mesa , R. Marques , M. Freire , J. D. Baena

The problem of unsupervised learning and segmentation of hyperspectral images is a significant challenge in remote sensing. The high dimensionality of hyperspectral data, presence of substantial noise, and overlap of classes all contribute…

Computer Vision and Pattern Recognition · Computer Science 2018-10-17 James M. Murphy , Mauro Maggioni

This paper focuses on the sparse subspace clustering problem, and develops an online algorithmic solution to cluster data points on-the-fly, without revisiting the whole dataset. The strategy involves an online solution of a sparse…

Optimization and Control · Mathematics 2024-07-16 Liam Madden , Stephen Becker , Emiliano Dall'Anese

Automatic discovery and curve fitting of absorption bands in hyperspectral data can enable the analyst to identify materials present in a scene by comparison with library spectra. This procedure is common in laboratory spectra, but is…

Instrumentation and Methods for Astrophysics · Physics 2014-01-23 Adrian J. Brown

We present a simple mathematical framework and API for parallel mesh and data distribution, load balancing, and overlap generation. It relies on viewing the mesh as a Hasse diagram, abstracting away information such as cell shape,…

Mathematical Software · Computer Science 2015-06-23 Matthew G. Knepley , Michael Lange , Gerard J. Gorman

One of the most common methods for reconstructing three-dimensional (3D) images of real objects is digital holography. This technique relies on the use of electro-optical devices that modify the phase or amplitude of light fields in a…

In this two-part paper, we present a novel framework and methodology to analyze data from certain image-based biochemical assays, e.g., ELISPOT and Fluorospot assays. In this first part, we start by presenting a physical partial…

Signal Processing · Electrical Eng. & Systems 2018-10-19 Pol del Aguila Pla , Joakim Jaldén

Highly multiplexed microscopy enables rich spatial characterization of tissues at single-cell resolution, yet most analyses rely on two-dimensional sections despite inherently three-dimensional tissue organization. Acquiring dense…

Computer Vision and Pattern Recognition · Computer Science 2026-04-10 Ido Harlev , Tamar Oukhanov , Raz Ben-Uri , Leeat Keren , Shai Bagon

In the first work of this series [physics/0204035] it was shown that the conformational space of a molecule could be described to a fair degree of accuracy by means of a central hyperplane arrangement. The hyperplanes divide the espace into…

Computational Physics · Physics 2008-12-13 Jacques Gabarro-Arpa

A new statistical model designed for regression analysis with a sparse design matrix is proposed. This new model utilizes the positions of the limited non-zero elements in the design matrix to decompose the regression model into…

Applications · Statistics 2022-01-17 Hsien-Wei Chen

Explicit representations of the global match distributions of pixel-wise correspondences between pairs of images are desirable for uncertainty estimation and downstream applications. However, the computation of the match density for each…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Zhichao Yin , Trevor Darrell , Fisher Yu

We target the problem of sparse 3D reconstruction of dynamic objects observed by multiple unsynchronized video cameras with unknown temporal overlap. To this end, we develop a framework to recover the unknown structure without sequencing…

Computer Vision and Pattern Recognition · Computer Science 2016-05-24 Enliang Zheng , Dinghuang Ji , Enrique Dunn , Jan-Michael Frahm

Many microscopy applications are limited by the total amount of usable light and are consequently challenged by the resulting levels of noise in the acquired images. This problem is often addressed via (supervised) deep learning based…

Image and Video Processing · Electrical Eng. & Systems 2020-08-20 Anna S. Goncharova , Alf Honigmann , Florian Jug , Alexander Krull

We use compressed sensing to demonstrate theoretically the reconstruction of sub-wavelength features from measured far-field, and provide experimental proof-of-concept. The methods can be applied to non-optical microscopes, provided the…

Optics · Physics 2015-05-14 Snir Gazit , Alexander Szameit , Yonina C. Eldar , Mordechai Segev

Demixing problems in many areas such as hyperspectral imaging and differential optical absorption spectroscopy (DOAS) often require finding sparse nonnegative linear combinations of dictionary elements that match observed data. We show how…

Machine Learning · Statistics 2013-01-04 Ernie Esser , Yifei Lou , Jack Xin

The next generation of proposed galaxy surveys will increase the number of galaxies with photometric redshifts by two orders of magnitude, drastically expanding both redshift range and detection threshold from the current state of the art.…

Cosmology and Nongalactic Astrophysics · Physics 2011-02-11 A. E. Schulz

This contribution introduces a novel signal extrapolation algorithm and its application to image error concealment. The signal extrapolation is carried out by iteratively generating a model of the signal suffering from distortion. Thereby,…

Image and Video Processing · Electrical Eng. & Systems 2022-07-15 Jürgen Seiler , André Kaup

Clustering is one of the most widely used procedures in the analysis of microarray data, for example with the goal of discovering cancer subtypes based on observed heterogeneity of genetic marks between different tissues. It is well-known…

Methodology · Statistics 2009-04-21 Heng Lian

Diffusion models (DMs) have exhibited remarkable efficacy in various image restoration tasks. However, existing approaches typically operate within the high-dimensional pixel space, resulting in high computational overhead. While methods…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Yang Zheng , Wen Li , Zhaoqiang Liu