English
Related papers

Related papers: Pattern formation in individual-based systems with…

200 papers

At the single-neuron level, precisely timed spikes can either constitute firing-rate codes or spike-pattern codes that utilize the relative timing between consecutive spikes. There has been little experimental support for the hypothesis…

Neurons and Cognition · Quantitative Biology 2009-12-18 Hugo Gabriel Eyherabide , Ariel Rokem , Andreas V. M. Herz , Ines Samengo

We propose new concepts in order to analyze and model the dependence structure between two time series. Our methods rely exclusively on the order structure of the data points. Hence, the methods are stable under monotone transformations of…

Statistics Theory · Mathematics 2015-02-02 Alexander Schnurr , Herold Dehling

Pattern-forming fronts are often controlled by an external stimulus which progresses through a stable medium at a fixed speed, rendering it unstable in its wake. By controlling the speed of excitation, such stimuli, or "triggers," can…

Dynamical Systems · Mathematics 2017-08-15 Ryan Goh , Arnd Scheel

We present results of numerical studies of the Landau-Ginzburg dynamics of the order parameter in one-dimensional models inspired by the condensed matter analogues of cosmological phase transitions. The main goal of our work is to show…

Condensed Matter · Physics 2007-05-23 Pablo Laguna , Wojciech Zurek

This paper addresses the question of how population diffusion affects the formation of the spatial patterns in the spatial epidemic model by Turing mechanisms. In particular, we present theoretical analysis to results of the numerical…

Populations and Evolution · Quantitative Biology 2009-09-29 Quan-Xing Liu , Zhen Jin

Modeling and parameter estimation for neuronal dynamics are often challenging because many parameters can range over orders of magnitude and are difficult to measure experimentally. Moreover, selecting a suitable model complexity requires a…

Dynamical Systems · Mathematics 2018-01-31 J. E. Rubin , B. Krauskopf , H. M. Osinga

The central task in the study of self-organization is to explore the general mechanism of emergences. However, this is inhibited by the missing of a full knowledge of the microscopic dynamics of emergence. Here, in this study, the…

Soft Condensed Matter · Physics 2022-04-21 Yang Yang , Zhi Chao Zhang , Fei Qi , Tian Hui Zhang

We revisit the Kibble-Zurek mechanism by analyzing the dynamics of phase ordering systems during an infinitely slow annealing across a second order phase transition. We elucidate the time and cooling rate dependence of the typical growing…

Statistical Mechanics · Physics 2013-05-29 Giulio Biroli , Leticia F. Cugliandolo , Alberto Sicilia

On a two-dimensional circular domain, we analyze the formation of spatio-temporal patterns for a class of coupled bulk-surface reaction-diffusion models for which a passive diffusion process occurring in the interior bulk domain is linearly…

Pattern Formation and Solitons · Physics 2020-08-11 Frédéric Paquin-Lefebvre , Wayne Nagata , Michael J. Ward

Spatial pattern formation in excitable fluctuating media was researched analytically from the point of view of the order parameters concept. The reaction-diffusion system in external noise is considered as a model of such medium. Stochastic…

Pattern Formation and Solitons · Physics 2017-03-16 Svetlana E. Kurushina , Valery V. Maximov , Yuri M. Romanovskii

Using statistical physics methods, we study generative diffusion models in the regime where the dimension of space and the number of data are large, and the score function has been trained optimally. Our analysis reveals three distinct…

Machine Learning · Computer Science 2025-01-08 Giulio Biroli , Tony Bonnaire , Valentin de Bortoli , Marc Mézard

A model of the dynamics of natural rotifer populations is described as a discrete nonlinear map depending on three parameters, which reflect characteristics of the population and environment. Model dynamics and their change by variation of…

Subcellular Processes · Quantitative Biology 2007-05-23 Faina S. Berezovskaya , Georgy P. Karev , Terry W. Snell

We are interested in modelling Darwinian evolution, resulting from the interplay of phenotypic variation and natural selection through ecological interactions. Our models are rooted in the microscopic, stochastic description of a population…

Probability · Mathematics 2016-08-16 Nicolas Champagnat , Régis Ferrière , Sylvie Méléard

In the non-adiabatic dynamics across a quantum phase transition, the Kibble-Zurek paradigm describes that the average number of topological defects is suppressed as a universal power law with the quench time scale. A conflicting…

Strongly Correlated Electrons · Physics 2025-03-21 S. Sadeghizade , R. Jafari , A. Langari

Several mechanisms have been proposed to explain the spontaneous generation of self-organized patterns, hypothesised to play a role in the formation of many of the magnificent patterns observed in Nature. In several cases of interest, the…

Pattern Formation and Solitons · Physics 2025-10-22 Riccardo Muolo , Malbor Asllani , Duccio Fanelli , Philip K. Maini , Timoteo Carletti

We explore a simplified class of models we call swarms, which are inspired by the collective behavior of social insects. We perform a mean-field stability analysis and perform numerical simulations of the model. Several interesting types of…

adap-org · Physics 2009-10-28 Erik M. Rauch , Mark M. Millonas , Dante R. Chialvo

We study pattern-forming instabilities in reaction-advection-diffusion systems. We develop an approach based on Lyapunov-Bloch exponents to figure out the impact of a spatially periodic mixing flow on the stability of a spatially…

Pattern Formation and Solitons · Physics 2010-11-15 A. V. Straube , A. Pikovsky

Spontaneous symmetry breaking plays a fundamental role in many areas of condensed matter and particle physics. A fundamental problem in ecology is the elucidation of the mechanisms responsible for biodiversity and stability. Neutral theory,…

Populations and Evolution · Quantitative Biology 2013-06-28 Claudio Borile , Miguel A. Muñoz , Sandro Azaele , Jayanth R. Banavar , Amos Maritan

We investigate an extension of the quantum Ising model in one spatial dimension including long-range $1 / r^{\alpha}$ interactions in its statics and dynamics with possible applications from heteronuclear polar molecules in optical lattices…

Quantum Gases · Physics 2017-09-15 Daniel Jaschke , Kenji Maeda , Joseph D. Whalen , Michael L. Wall , Lincoln D. Carr

We numerically study the density of topological defects for a two-dimensional assembly of particles driven over quenched disorder as a function of quench rate through the nonequilibrium phase transition from a plastic disordered flowing…

Statistical Mechanics · Physics 2024-04-23 C. J. O. Reichhardt , A. del Campo , C. Reichhardt