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The dynamics of contact networks and epidemics of infectious diseases often occur on comparable time scales. Ignoring one of these time scales may provide an incomplete understanding of the population dynamics of the infection process. We…

Populations and Evolution · Quantitative Biology 2021-02-09 Luis E C Rocha , Naoki Masuda

This review article provides an overview of recent work in the modeling and analysis of recurrent events arising in engineering, reliability, public health, biomedicine and other areas. Recurrent event modeling possesses unique facets…

Methodology · Statistics 2007-08-03 Edsel A. Peña

We introduce a new method for inference in stochastic epidemic models which uses recursive multinomial approximations to integrate over unobserved variables and thus circumvent likelihood intractability. The method is applicable to a class…

Methodology · Statistics 2021-02-24 Nick Whiteley , Lorenzo Rimella

Random geometric graphs defined on Euclidean subspaces, also called Gilbert graphs, are widely used to model spatially embedded networks across various domains. In such graphs, nodes are located at random in Euclidean space, and any two…

Probability · Mathematics 2026-04-23 Sarat Moka , Christian Hirsch , Volker Schmidt , Dirk Kroese

Computer simulations have become an important tool across the biomedical sciences and beyond. For many important problems several different models or hypotheses exist and choosing which one best describes reality or observed data is not…

Quantitative Methods · Quantitative Biology 2010-01-20 Tina Toni , Michael P. H. Stumpf

In this paper we address the problem of rare-event simulation for heavy-tailed L\'evy processes with infinite activities. We propose a strongly efficient importance sampling algorithm that builds upon the sample path large deviations for…

Probability · Mathematics 2020-07-17 Xingyu Wang , Chang-Han Rhee

Extreme value statistics provides accurate estimates for the small occurrence probabilities of rare events. While theory and statistical tools for univariate extremes are well-developed, methods for high-dimensional and complex data sets…

Methodology · Statistics 2021-01-06 Sebastian Engelke , Jevgenijs Ivanovs

During the ongoing COVID-19 pandemic, mathematical models of epidemic spreading have emerged as powerful tools to produce valuable predictions of the evolution of the pandemic, helping public health authorities decide which intervention…

Dynamical Systems · Mathematics 2021-11-18 Lorenzo Zino , Ming Cao

A new approach to Dynamical Monte Carlo Methods is introduced to simulate markovian processes. We apply this approach to formulate and study an epidemic Generalized SIRS model. The results are in excellent agreement with the forth order…

Computational Physics · Physics 2009-11-07 O. E. Aiello , Marco A. A. da Silva

This chapter is devoted to the computation of equilibrium (thermodynamic) properties of quantum systems. In particular, we will be interested in the situation where the interaction between particles is so strong that it cannot be treated as…

Mesoscale and Nanoscale Physics · Physics 2016-02-03 Alexei Filinov , Jens Böning , Michael Bonitz

Multi-type recurrent events are often encountered in medical applications when two or more different event types could repeatedly occur over an observation period. For example, patients may experience recurrences of multi-type nonmelanoma…

Methodology · Statistics 2021-06-10 Khaled F. Bedair , Yili Hong , Hussein R. Al-Khalidi

We propose a class of strongly efficient rare event simulation estimators for random walks and compound Poisson processes with a regularly varying increment/jump-size distribution in a general large deviations regime. Our estimator is based…

Probability · Mathematics 2017-06-14 Bohan Chen , Jose Blanchet , Chang-Han Rhee , Bert Zwart

The past decade has seen a revived interest in the unavoidable or intrinsic noise in biochemical and genetic networks arising from the finite copy number of the participating species. That is, rather than modeling regulatory networks in…

Molecular Networks · Quantitative Biology 2015-03-17 Aleksandra M. Walczak , Andrew Mugler , Chris H. WIggins

The current and upcoming generation of Very Large Volume Neutrino Telescopes---collecting unprecedented quantities of neutrino events---can be used to explore subtle effects in oscillation physics, such as (but not restricted to) the…

Data Analysis, Statistics and Probability · Physics 2019-12-05 IceCube Collaboration , M. G. Aartsen , M. Ackermann , J. Adams , J. A. Aguilar , M. Ahlers , M. Ahrens , I. Al Samarai , D. Altmann , K. Andeen , T. Anderson , I. Ansseau , G. Anton , C. Argüelles , T. C. Arlen , J. Auffenberg , S. Axani , H. Bagherpour , X. Bai , A. Balagopal V. , J. P. Barron , I. Bartos , S. W. Barwick , V. Baum , R. Bay , J. J. Beatty , J. Becker Tjus , K. -H. Becker , S. BenZvi , D. Berley , E. Bernardini , D. Z. Besson , G. Binder , D. Bindig , E. Blaufuss , S. Blot , C. Bohm , M. Bohmer , M. Börner , F. Bos , S. Böser , O. Botner , E. Bourbeau , J. Bourbeau , F. Bradascio , J. Braun , M. Brenzke , H. -P. Bretz , S. Bron , J. Brostean-Kaiser , A. Burgman , R. S. Busse , T. Carver , E. Cheung , D. Chirkin , A. Christov , K. Clark , L. Classen , G. H. Collin , J. M. Conrad , P. Coppin , P. Correa , D. F. Cowen , R. Cross , P. Dave , M. Day , J. P. A. M. de André , C. De Clercq , J. J. DeLaunay , H. Dembinski , S. De Ridder , P. Desiati , K. D. de Vries , G. de Wasseige , M. de With , T. DeYoung , J. C. Díaz-Vélez , V. di Lorenzo , H. Dujmovic , J. P. Dumm , M. Dunkman , M. A. DuVernois , E. Dvorak , B. Eberhardt , T. Ehrhardt , B. Eichmann , P. Eller , R. Engel , J. J. Evans , P. A. Evenson , S. Fahey , A. R. Fazely , J. Felde , K. Filimonov , C. Finley , S. Flis , A. Franckowiak , E. Friedman , A. Fritz , T. K. Gaisser , J. Gallagher , A. Gartner , L. Gerhardt , R. Gernhaeuser , K. Ghorbani , W. Giang , T. Glauch , T. Glüsenkamp , A. Goldschmidt , J. G. Gonzalez , D. Grant , Z. Griffith , C. Haack , A. Hallgren , F. Halzen , K. Hanson , J. Haugen , A. Haungs , D. Hebecker , D. Heereman , K. Helbing , R. Hellauer , F. Henningsen , S. Hickford , J. Hignight , G. C. Hill , K. D. Hoffman , B. Hoffmann , R. Hoffmann , T. Hoinka , B. Hokanson-Fasig , K. Holzapfel , K. Hoshina , F. Huang , M. Huber , T. Huber , T. Huege , K. Hultqvist , M. Hünnefeld , R. Hussain , S. In , N. Iovine , A. Ishihara , E. Jacobi , G. S. Japaridze , M. Jeong , K. Jero , B. J. P. Jones , P. Kalaczynski , O. Kalekin , W. Kang , D. Kang , A. Kappes , D. Kappesser , T. Karg , A. Karle , T. Katori , U. Katz , M. Kauer , A. Keivani , J. L. Kelley , A. Kheirandish , J. Kim , M. Kim , T. Kintscher , J. Kiryluk , T. Kittler , S. R. Klein , R. Koirala , H. Kolanoski , L. Köpke , C. Kopper , S. Kopper , J. P. Koschinsky , D. J. Koskinen , M. Kowalski , C. B. Krauss , K. Krings , M. Kroll , G. Krückl , S. Kunwar , N. Kurahashi , T. Kuwabara , A. Kyriacou , M. Labare , J. L. Lanfranchi , M. J. Larson , F. Lauber , D. Lennarz , K. Leonard , M. Lesiak-Bzdak , A. Leszczynska , M. Leuermann , Q. R. Liu , E. Lohfink , J. LoSecco , C. J. Lozano Mariscal , L. Lu , J. Lünemann , W. Luszczak , J. Madsen , G. Maggi , K. B. M. Mahn , S. Mancina , S. Mandalia , S. Marka , Z. Marka , R. Maruyama , K. Mase , R. Maunu , K. Meagher , M. Medici , M. Meier , T. Menne , G. Merino , T. Meures , S. Miarecki , J. Micallef , G. Momenté , T. Montaruli , R. W. Moore , M. Moulai , R. Nahnhauer , P. Nakarmi , U. Naumann , G. Neer , H. Niederhausen , S. C. Nowicki , D. R. Nygren , A. Obertacke Pollmann , M. Oehler , A. Olivas , A. O'Murchadha , E. O'Sullivan , A. Palazzo , T. Palczewski , H. Pandya , D. V. Pankova , L. Papp , P. Peiffer , J. A. Pepper , C. Pérez de los Heros , T. C. Petersen , D. Pieloth , E. Pinat , J. L. Pinfold , M. Plum , P. B. Price , G. T. Przybylski , C. Raab , L. Rädel , M. Rameez , L. Rauch , K. Rawlins , I. C. Rea , R. Reimann , B. Relethford , M. Relich , M. Renschler , E. Resconi , W. Rhode , M. Richman , M. Riegel , S. Robertson , M. Rongen , C. Rott , T. Ruhe , D. Ryckbosch , D. Rysewyk , I. Safa , T. Sälzer , S. E. Sanchez Herrera , A. Sandrock , J. Sandroos , P. Sandstrom , M. Santander , S. Sarkar , S. Sarkar , K. Satalecka , H. Schieler , P. Schlunder , T. Schmidt , A. Schneider , S. Schoenen , S. Schöneberg , F. G. Schröder , L. Schumacher , S. Sclafani , D. Seckel , S. Seunarine , M. H. Shaevitz , J. Soedingrekso , D. Soldin , S. Söldner-Rembold , M. Song , G. M. Spiczak , C. Spiering , J. Stachurska , M. Stamatikos , T. Stanev , A. Stasik , R. Stein , J. Stettner , A. Steuer , T. Stezelberger , R. G. Stokstad , A. Stößl , N. L. Strotjohann , T. Stuttard , G. W. Sullivan , M. Sutherland , I. Taboada , A. Taketa , H. K. M. Tanaka , J. Tatar , F. Tenholt , S. Ter-Antonyan , A. Terliuk , S. Tilav , P. A. Toale , M. N. Tobin , C. Tönnis , S. Toscano , D. Tosi , M. Tselengidou , C. F. Tung , A. Turcati , C. F. Turley , B. Ty , E. Unger , M. Usner , J. Vandenbroucke , W. Van Driessche , D. van Eijk , N. van Eijndhoven , S. Vanheule , J. van Santen , D. Veberic , E. Vogel , M. Vraeghe , C. Walck , A. Wallace , M. Wallraff , F. D. Wandler , N. Wandkowsky , A. Waza , C. Weaver , A. Weindl , M. J. Weiss , C. Wendt , J. Werthebach , S. Westerhoff , B. J. Whelan , K. Wiebe , C. H. Wiebusch , L. Wille , D. R. Williams , L. Wills , M. Wolf , J. Wood , T. R. Wood , E. Woolsey , K. Woschnagg , G. Wrede , S. Wren , D. L. Xu , X. W. Xu , Y. Xu , J. P. Yanez , G. Yodh , S. Yoshida , T. Yuan

Infectious diseases are caused by pathogenic microorganisms and can spread through different ways. Mathematical models and computational simulation have been used extensively to investigate the transmission and spread of infectious…

Accurate and efficient estimation of rare events probabilities is of significant importance, since often the occurrences of such events have widespread impacts. The focus in this work is on precisely quantifying these probabilities, often…

Methodology · Statistics 2023-05-23 Konstantinos G. Papakonstantinou , Hamed Nikbakht , Elsayed Eshra

Over a year after the start of the COVID-19 epidemics, we are still facing the virus and it is hard to correctly predict its future spread over weeks to come, as well as the impacts of potential political interventions. Current epidemic…

Multiagent Systems · Computer Science 2021-12-03 Benoit Doussin , Carole Adam , Didier Georges

In this work, we propose an algorithm to simulate rare events for electronic circuit design. Our approach heavily relies on a smart use of importance sampling, which enables us to tackle probabilities of the magnitude 10 --10. Not only can…

Probability · Mathematics 2021-09-20 Xavier Jonsson , Jérôme Lelong

Epidemics are inherently stochastic, and stochastic models provide an appropriate way to describe and analyse such phenomena. Given temporal incidence data consisting of, for example, the number of new infections or removals in a given time…

Methodology · Statistics 2024-05-24 Sam A. Whitaker , Andrew Golightly , Colin S. Gillespie , Theodore Kypraios

We develop a simulation tool to support policy-decisions about healthcare for chronic diseases in defined populations. Incident disease-cases are generated in-silico from an age-sex characterised general population using standard…

Applications · Statistics 2010-09-03 Nathan Green , Duncan Smith , Matthew Sperrin , Iain Buchan