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The purpose of this paper is to provide new formulas for the effective diffusion coefficient of a generalized Fick-Jacobs equation for narrow 3-dimensional channels. The generalized Fick-Jacobs equation is obtained by projecting the…

Mathematical Physics · Physics 2014-12-01 Carlos Valero Valdes , Rafael Herrera Guzman

The purpose of this paper is to provide equations to model the evolution of effective diffusion over a Riemannian fiber bundle (under the hypothesis of infinite diffusion rate along compact fibers). These equations are obtained by…

Mathematical Physics · Physics 2015-02-24 Carlos Valero Valdes

The purpose of this paper is to provide a formula for the effective diffusion operator obtained by projecting the 3-dimensional diffusion equation onto a 2-dimensional plane, assuming reflective boundary conditions at two surfaces in…

Mathematical Physics · Physics 2016-08-24 Carlos Valero Valdes

A relation between Fick-Jacobs and Schr\"{o}dinger equation is shown. When the diffusion coefficient is constant, exact solutions for Fick-Jacobs equation are obtained. Using a change of variable the general case is studied.

Mathematical Physics · Physics 2012-11-27 Juan M. Romero , O. González-Gaxiola , G. Chacón-Acosta

A Fokker Planck equation on fractal curves is obtained, starting from Chapmann-Kolmogorov equation on fractal curves. This is done using the recently developed calculus on fractals, which allows one to write differential equations on…

Mathematical Physics · Physics 2010-04-27 Seema E. Satin , Abhay Parvate , A. D. Gangal

We study diffusion processes in regions generated by sliding a cross section by the phase flow of vector filed on curved spaces of arbitrary dimension. We do this by studying the effective diffusion coefficient D that arises when trying to…

Mathematical Physics · Physics 2020-08-13 Carlos Valero

Diffusion of chemicals or tracer molecules through complex systems containing irregularly shaped channels is important in many applications. Most theoretical studies based on the famed Fick-Jacobs equation focus on the idealised case of…

Statistical Mechanics · Physics 2014-12-24 Max Bauer , Aljaz Godec , Ralf Metzler

Diffusion of point-like non interacting particles in a two-dimensional (2D) channel of varying cross section is considered. The particles are biased by a constant force in the transverse direction. We apply our recurrence mapping procedure,…

Statistical Mechanics · Physics 2015-05-28 Pavol Kalinay

We examine the dispersion of Brownian particles in a symmetric two dimensional channel, this classical problem has been widely studied in the literature using the so called Fick-Jacobs' approximation and its various improvements. Most…

Statistical Mechanics · Physics 2019-05-29 M. Mangeat , T. Guérin , D. S. Dean

Fractional Fokker-Planck equation plays an important role in describing anomalous dynamics. To the best of our knowledge, the existing discussions mainly focus on this kind of equation involving one diffusion operator. In this paper, we…

Numerical Analysis · Mathematics 2021-09-08 Jing Sun , Weihua Deng , Daxin Nie

We study the diffusion equation on the surface of a 4D sphere and obtain a Kubo formula for the diffusion coefficient.

Statistical Mechanics · Physics 2007-05-23 J. -M. Caillol

The purpose of this tutorial is to introduce the main concepts behind normal and anomalous diffusion. Starting from simple, but well known experiments, a series of mathematical modeling tools are introduced, and the relation between them is…

Chaotic Dynamics · Physics 2008-05-06 Loukas Vlahos , Heinz Isliker , Yannis Kominis , Kyriakos Hizanidis

Particle diffusion in a two dimensional curved surface embedded in $R_3$ is considered. In addition to the usual diffusion flow, we find a new flow with an explicit curvature dependence. New diffusion equation is obtained in $\epsilon$…

Biological Physics · Physics 2015-05-14 Naohisa Ogawa

The~numerical solutions to a non-linear Fractional Fokker--Planck (FFP) equation are studied estimating the generalized diffusion coefficients. The~aim is to model anomalous diffusion using an FFP description with fractional velocity…

Plasma Physics · Physics 2018-10-08 Johan Anderson , Sara Moradi , Tariq Rafiq

Based on Fick's 2nd law the development of moving particle semi-implicit method for predicting diffusion process is proposed in this study

Fluid Dynamics · Physics 2020-10-07 Ziqi Zhou

We consider a generalised diffusion equation in two dimensions for modeling diffusion on a comb-like structures. We analyse the probability distribution functions and we derive the mean squared displacement in $x$ and $y$ directions.…

Statistical Mechanics · Physics 2016-06-23 Trifce Sandev , Alexander Iomin , Holger Kantz , Ralf Metzler , Aleksei Chechkin

We present a position Langevin equation for overdamped particle motion on rough two-dimensional surfaces. A Brownian Dynamics algorithm is suggested to evolve this equation numerically, allowing for the prediction of effective (projected)…

Soft Condensed Matter · Physics 2009-11-13 Ali Naji , Frank L. H. Brown

Transport of point-size Brownian particles under the influence of a constant and uniform force field through a three-dimensional channel with smoothly varying periodic cross-section is investigated. Here, we employ an asymptotic analysis in…

Statistical Mechanics · Physics 2011-07-14 Steffen Martens , Gerhard Schmid , Lutz Schimansky-Geier , Peter Hänggi

Aims. The process of pitch-angle isotropization is important for many applications ranging from diffusive shock acceleration to large-scale cosmic-ray transport. Here, the basic analytical description is revisited on the basis of recent…

High Energy Astrophysical Phenomena · Physics 2015-06-17 R. C. Tautz

For a substance diffusing on a curved surface, we obtain an explicit relation valid for very small values of the time, between the local concentration, the diffusion coefficient, the intrinsic spatial curvature and the time. We recover the…

Biological Physics · Physics 2009-11-10 J. Balakrishnan
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