Related papers: A 2-chain can interlock with an open 10-chain
Chaining algorithms aim to form a semi-global alignment of two sequences based on a set of anchoring local alignments as input. Depending on the optimization criteria and the exact definition of a chain, there are several $O(n \log n)$ time…
We propose the notion of $k$-integration as a measure of equality of opportunity in social networks. A social network is $k$-integrated if there is a path of length at most $k$ between any two individuals, thus guaranteeing that everybody…
It is known that any open necklace with beads of $t$ types in which the number of beads of each type is divisible by $k$, can be partitioned by at most $(k-1)t$ cuts into intervals that can be distributed into $k$ collections, each…
Optically linked ion traps are promising as components of network-based quantum technologies, including communication systems and modular computers. Experimental results achieved to date indicate that the fidelity of operations within each…
Given a n points in two dimensional space, a Manhattan Network G is a network that connects all n points with either horizontal or vertical edges, with the property that for any two point in G should be connected by a Manhattan path and…
Consider a graph $G$ with chromatic number $k$ and a collection of complete bipartite graphs, or bicliques, that cover the edges of $G$. We prove the following two results: \medskip \noindent $\bullet$ If the bicliques partition the edges…
We say that two knots are friends if they share the same 0-surgery. Two friends with different sliceness status would provide a counterexample to the 4-dimensional smooth Poincar\'e conjecture. Here we create a census of all friends with…
The transient number of a knot K, denoted tr(K), is the minimal number of simple arcs that have to be attached to K, in order that K can be homotoped to a trivial knot in a regular neighborhood of the union of K and the arcs. We give a…
In this paper we study further when tangles embed into the unknot, the unlink or a split link. In particular, we study obstructions to these properties through geometric characterizations, tangle sums and colorings. As an application we…
We consider N initially disentangled spins, embedded in a ring or d-dimensional lattice of arbitrary geometry, which interact via some long--range Ising--type interaction. We investigate relations between entanglement properties of the…
We introduce new sufficient conditions for intrinsic knotting and linking. A graph on n vertices with at least 4n-9 edges is intrinsically linked. A graph on n vertices with at least 5n-14 edges is intrinsically knotted. We also classify…
A graph G is a multi-interval PCG if there exist an edge weighted tree T with non-negative real values and disjoint intervals of the non-negative real half-line such that each node of G is uniquely associated to a leaf of T and there is an…
We give an algorithm that decides whether the bipartite crossing number of a given graph is at most $k$. The running time of the algorithm is upper bounded by $2^{O(k)} + n^{O(1)}$, where $n$ is the number of vertices of the input graph,…
Given a set $X$, a collection $\mathcal{F} \subset \mathcal{P}(X)$ is said to be $k$-Sperner if it does not contain a chain of length $k+1$ under set inclusion and it is saturated if it is maximal with respect to this probability. Gerbner…
The Minimum Fill-in problem is to decide if a graph can be triangulated by adding at most k edges. Kaplan, Shamir, and Tarjan [FOCS 1994] have shown that the problem is solvable in time O(2^(O(k)) + k2 * nm) on graphs with n vertices and m…
The lattice stick number $s_L(K)$ of a knot $K$ is defined to be the minimal number of straight line segments required to construct a stick presentation of $K$ in the cubic lattice. In this paper, we find an upper bound on the lattice stick…
We obtain a polynomial-time 17/12-approximation algorithm for the minimum-cost 2-vertex-connected spanning subgraph problem, restricted to graphs of minimum degree at least 3. Our algorithm uses the framework of ear-decompositions for…
We study the minimum number of maximum matchings in a bipartite multigraph G with parts $X$ and $Y$ under various conditions, refining the well-known lower bound due to M. Hall. When $|X|=n$, every vertex in $X$ has degree at least $k$, and…
Multiple network alignment is the problem of identifying similar and related regions in a given set of networks. While there are a large number of effective techniques for pairwise problems with two networks that scale in terms of edges,…
Minimal prime graphs are connected graphs on at least two vertices whose complements satisfy the following conditions: triangle-freeness, 3-colorability, and edge-maximality with respect to the latter two properties. These graphs are prime…