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This paper describes an ongoing multi-scale visual analytics approach for exploring and analyzing biomedical knowledge at scale.We utilize global and local views, hierarchical and flow-based graph layouts, multi-faceted search, neighborhood…

Human-Computer Interaction · Computer Science 2021-10-22 Fahd Husain , Rosa Romero-Gomez , Emily Kuang , Dario Segura , Adamo Carolli , Lai Chung Liu , Manfred Cheung , Yohann Paris

Document clustering is a text mining technique used to provide better document search and browsing in digital libraries or online corpora. A lot of research has been done on biomedical document clustering that is based on using existing…

Computation and Language · Computer Science 2018-10-24 Setu Shah , Xiao Luo

Ontology-based approaches for predicting gene-disease associations include the more classical semantic similarity methods and more recently knowledge graph embeddings. While semantic similarity is typically restricted to hierarchical…

Machine Learning · Computer Science 2021-06-01 Susana Nunes , Rita T. Sousa , Catia Pesquita

The establishment of links between data (e.g., patient records) and Web resources (e.g., literature) and the proper visualization of such discovered knowledge is still a challenge in most Life Science domains (e.g., biomedicine). In this…

Information Retrieval · Computer Science 2010-12-09 R. Berlanga , E. Jimenez-Ruiz , V. Nebot

The paper utilizes the graph embeddings generated for entities of a large biomedical database to perform link prediction to capture various new relationships among different entities. A novel node similarity measure is proposed that…

Information Retrieval · Computer Science 2021-11-01 Prakhar Gurawa , Matthias Nickles

Pain is a complex concept that can interconnect with other concepts such as a disorder that might cause pain, a medication that might relieve pain, and so on. To fully understand the context of pain experienced by either an individual or…

Machine Learning · Computer Science 2023-08-21 Jaya Chaturvedi , Tao Wang , Sumithra Velupillai , Robert Stewart , Angus Roberts

For users, recommendations can sometimes seem odd or counterintuitive. Visualizing recommendations can remove some of this mystery, showing how a recommendation is grouped with other choices. A drawing can also lead a user's eye to other…

Information Retrieval · Computer Science 2009-06-30 Emden Gansner , Yifan Hu , Stephen Kobourov , Chris Volinsky

Narrative visualization aims to communicate scientific results to a general audience and garners significant attention in various applications. Merging exploratory and explanatory visualization could effectively support a non-expert…

Computers and Society · Computer Science 2026-02-26 Monique Meuschke , Laura Garrison , Noeska Smit , Stefan Bruckner , Kai Lawonn , Bernhard Preim

Visualizing medical histories of patients with complex chronic diseases (e.g., discordant chronic comorbidities (DCCs)) is a challenge for patients, their healthcare providers, and their support network. DCCs are health conditions in which…

Human-Computer Interaction · Computer Science 2022-12-06 Sankarshan Dasgupta , Tom Ongwere

Overlay maps of science are global base maps over which subsets of publications can be projected. Such maps can be used to monitor, explore, and study research through its publication output. Most maps of science, including overlay maps,…

Digital Libraries · Computer Science 2024-03-15 Peter Sjögårde

Recent advances in methods and techniques enable us to develop an interactive overlay to the global map of science based on aggregated citation relations among the 9,162 journals contained in the Science Citation Index and Social Science…

Digital Libraries · Computer Science 2011-05-17 Loet Leydesdorff , Ismael Rafols

With the rise of the open data movement a lot of statistical data has been made publicly available by governments, statistical offices and other organizations. First efforts to visualize are made by the data providers themselves. Data…

Human-Computer Interaction · Computer Science 2011-10-17 Daniel Hienert , Benjamin Zapilko , Philipp Schaer , Brigitte Mathiak

We propose a general framework for visualizing any intermediate embedding representation used by any neural survival analysis model. Our framework is based on so-called anchor directions in an embedding space. We show how to estimate these…

Machine Learning · Statistics 2023-05-12 George H. Chen

The combination of clinical and personal health and wellbeing data can tell us much about our behaviors, risks and overall status. The way this data is visualized may affect our understanding of our own health. To study this effect, we…

Human-Computer Interaction · Computer Science 2016-04-08 Andres Ledesma , Hannu Nieminen , Päivi Valve , Miikka Ermes , Holly Jimison , Misha Pavel

Electronic medical records contain multi-format electronic medical data that consist of an abundance of medical knowledge. Facing with patient's symptoms, experienced caregivers make right medical decisions based on their professional…

Databases · Computer Science 2017-07-25 Meng Wang , Jiaheng Zhang , Jun Liu , Wei Hu , Sen Wang , Xue Li , Wenqiang Liu

The largest collection of medical evidence in the world is PubMed. However, the significant barrier in accessing and extracting information is information organization. A factor that contributes towards this barrier is managing medical…

Information Retrieval · Computer Science 2018-09-07 Michael Segundo Ortiz , Sam Bubnovich , Mengqian Wang , Kazuhiro Seki Ph. D. , Javed Mostafa Ph. D

The rapid development of tools for acquisition and storage of information has lead to the formation of enormous medical databases. The large quantity of data definitely surpasses the abilities of humans for efficient usage without…

Information Retrieval · Computer Science 2009-04-03 Petar Kormushev

Dementia care requires healthcare professionals to balance a patient's medical needs with a deep understanding of their personal needs, preferences, and emotional cues. However, current digital tools prioritise quantitative metrics over…

Human-Computer Interaction · Computer Science 2025-09-11 Rhiannon Owen , Jonathan C. Roberts

Learning domain-invariant visual representations is important to train a model that can generalize well to unseen target task domains. Recent works demonstrate that text descriptions contain high-level class-discriminative information and…

Computer Vision and Pattern Recognition · Computer Science 2024-12-25 Nokyung Park , Daewon Chae , Jeongyong Shim , Sangpil Kim , Eun-Sol Kim , Jinkyu Kim

Maps have played an important role in epidemiology and public health since the beginnings of these disciplines. With the advent of geographical information systems and advanced information visualization techniques, interactive maps have…

Methodology · Statistics 2022-06-14 Saturnino Luz , Masood Masoodian
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