Related papers: Khovanov-Kauffman Homology for embedded Graphs
Khovanov introduced a bigraded cohomology theory of links whose graded Euler characteristic is the Jones polynomial. The theory was subsequently applied to the chromatic polynomial of graph, resulting in a categorification known as the…
In the graph node embedding problem, embedding spaces can vary significantly for different data types, leading to the need for different GNN model types. In this paper, we model the embedding update of a node feature as a Hamiltonian orbit…
This is a survey article about knot Floer homology. We present three constructions of this invariant: the original one using holomorphic disks, a combinatorial description using grid diagrams, and a combinatorial description in terms of the…
Hypergraph is a topological model for networks. In order to study the topology of hypergraphs, the homology of the associated simplicial complexes and the embedded homology have been invented. In this paper, we give some algorithms to…
We introduce a homotopy theory of digraphs (directed graphs) and prove its basic properties, including the relations to the homology theory of digraphs constructed by the authors in previous papers. In particular, we prove the homotopy…
We define and study a bigraded knot invariant whose Euler characteristic is the Alexander polynomial, closely connected to knot Floer homology. The invariant is the homology of a chain complex whose generators correspond to Kauffman states…
We use a special kind of 2-dimensional extended Topological Quantum Field Theories (TQFTs), so-called open-closed TQFTs, in order to extend Khovanov homology from links to arbitrary tangles, not necessarily even. For every plane diagram of…
We explore the complex associated to a link in the geometric formalism of Khovanov's (n=2) link homology theory, determine its exact underlying algebraic structure and find its precise universality properties for link homology functors. We…
By considering a version of Khovanov homology incorporating both the Lee and $E(-1)$ differentials, we construct a $1$-parameter family of concordance homomorphisms similar to the Upsilon invariant from knot Floer homology. This invariant…
Link homology theories (such as knot Floer homology and Khovanov homology) have become indispensable tools for studying knots and links, including powerful 4-dimensional obstructions. These notes, based on lectures given at the 2024 Georgia…
A homology and cohomology theory for topological quandles are introduced. The relation between these (co)homology groups and quandle (co)homology groups are studied. The 1 - topological quandle cocycles are used to compute state sum…
To a smooth, compact, oriented, properly-embedded surface in the $4$-ball, we define an invariant of its boundary-preserving isotopy class from the Khovanov homology of its boundary link. Previous work showed that when the boundary link is…
We discuss the cohomology of the bridgeless graph complex, that is, the subcomplex of the Kontsevich graph complex spanned by bridgeless graphs.
We present an easy example of mutant links with different Khovanov homology. The existence of such an example is important because it shows that Khovanov homology cannot be defined with a skein rule similar to the skein relation for the…
In the branch of mathematics known as graph theory, graphs are considered as a set of points, called vertices, with connections between these points, called edges. The purpose of this paper is to study mappings between two graphs that have…
In this paper, we generalize the embedded homology groups of hypergraphs initially given in [S. Bressan, J. Li, S. Ren, and J. Wu, The embedded homology of hypergraphs and applications, Asian J. Math. 23(3)(2019) 479-500] and study the…
We apply the techniques of totally twisted Khovanov homology to the constructions by M. Asaeda, J. Przytycki, and A. Sikora of Khovanov type homologies for links and tangles in I-bundles over (orientable) surfaces. As a result we describe…
Given any diagram of a link, we define on the cube of Kauffman's states a "2-complex" whose homology is an invariant of the associated framed links, and such that the graded Euler characteristic reproduces the unnormalized Kauffman bracket.…
In [Duke Math. J. 101 (1999) 359-426], Mikhail Khovanov constructed a homology theory for oriented links, whose graded Euler characteristic is the Jones polynomial. He also explained how every link cobordism between two links induces a…
We review the construction of Heegaard Floer homology for closed three-manifolds and also for knots and links in the three-sphere. We also discuss three applications of this invariant to knot theory: studying the Thurston norm of a link…