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We compare six numerical integrators' performance when simulating a regular spiking cortical neuron model whose 74-compartments are equipped with eleven membrane ion channels and Calcium dynamics. Four methods are explicit and two are…
The CHDG method is a hybridizable discontinuous Galerkin (HDG) finite element method suitable for the iterative solution of time-harmonic wave propagation problems. Hybrid unknowns corresponding to transmission variables are introduced at…
We show that a pseudospectral representation of the wavefunction using multiple spatial domains of variable size yields a highly accurate, yet efficient method to solve the time-dependent Schr\"odinger equation. The overall spatial domain…
A new computational algorithm, the discrete singular convolution (DSC), is introduced for computational electromagnetics. The basic philosophy behind the DSC algorithm for the approximation of functions and their derivatives is studied.…
The implicit compact finite-difference scheme was developed for evolutionary partial differential parabolic and Schr\"odinger-type equations and systems with a weak nonlinearity. To make a temporal step of the compact implicit scheme we…
In this paper we present a pseudospectral method in the disk. Unlike the methods known until now, the disk is not duplicated. Moreover, we solve the Laplace equation subjected to nonhomogeneous Dirichlet, Neumann and Robin boundary…
In this paper, we study loaded modified diffusion equation (the Hallaire equation with the fractional derivative with respect to time). The compact finite difference scheme of Crank-Nicholson type of higher order is developed for…
A multigrid method for the Stokes system discretized with an Hdiv-conforming discontinuous Galerkin method is presented. It acts on the combined velocity and pressure spaces and thus does not need a Schur complement approximation. The…
This work is about a new two-level solver for Helmholtz equations discretized by finite elements. The method is inspired by two-grid methods for finite-difference Helmholtz problems as well as by previous work on two-level…
We develop a new dispersion minimizing compact finite difference scheme for the Helmholtz equation in 2 and 3 dimensions. The scheme is based on a newly developed ray theory for difference equations. A discrete Helmholtz operator and a…
We describe algorithms for finding harmonic cochains, an essential ingredient for solving elliptic partial differential equations in exterior calculus. Harmonic cochains are also useful in computational topology and computer graphics. We…
A typical system of k difference (or differential) equations can be compressed, or folded into a difference (or ordinary differential) equation of order k. Such foldings appear in control theory as the canonical forms of the controllability…
Fractional diffusion equations (FDEs) are a mathematical tool used for describing some special diffusion phenomena arising in many different applications like porous media and computational finance. In this paper, we focus on a…
A spectral method is described for solving coupled elliptic problems on an interior and an exterior domain. The method is formulated and tested on the two-dimensional interior Poisson and exterior Laplace problems, whose solutions and their…
We develop and analyze a new hybridizable discontinuous Galerkin (HDG) method for solving third-order Korteweg-de Vries type equations. The approximate solutions are defined by a discrete version of a characterization of the exact solution…
An explicit numerical scheme is proposed for solving the initial-boundary value problem for the radiative transport equation in a rectangular domain with completely absorbing boundary condition. An upwind finite difference approximation is…
The goal of the present work is to solve a linear dispersive equation with variable coefficient advection on an unbounded domain. In this setting, transparent boundary conditions are vital to allow waves to leave (or even re-enter) the,…
A transfer matrix method is presented for solving the scattering problem for the quasi one-dimensional massless Dirac equation applied to graphene in the presence of an arbitrary inhomogeneous electric and perpendicular magnetic field. It…
In this study, we investigate atom--dimer scattering within the framework of the hyperspherical method. The coupled channel Schr\"odinger equation is solved using the R-matrix propagation technique combined with the smooth variable…
We propose and analyze an iterative high-order hybridized discontinuous Galerkin (iHDG) discretization for linear partial differential equations. We improve our previous work (SIAM J. Sci. Comput. Vol. 39, No. 5, pp. S782--S808) in several…