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The article is devoted to phenomena of symmetries and algebras in matrix presentations of the genetic code. The Kronecker family of the genetic matrices is investigated, which is based on the alphabetical matrix [C A; U G], where C, A, U, G…

Other Quantitative Biology · Quantitative Biology 2010-05-28 Sergey V. Petoukhov

Matrix forms of the representation of the multi-level system of molecular-genetic alphabets have revealed algebraic properties of this system. Families of genetic (4*4)- and (8*8)-matrices show unexpected connections of the genetic system…

Other Quantitative Biology · Quantitative Biology 2016-07-18 Sergey V. Petoukhov

Algebraic properties of the genetic code are analyzed. The investigations of the genetic code on the basis of matrix approaches ("matrix genetics") are described. The degeneracy of the vertebrate mitochondria genetic code is reflected in…

Quantitative Methods · Quantitative Biology 2008-06-06 Sergey V. Petoukhov

Very recently new genetic operators, called geometric semantic operators, have been defined for genetic programming. Contrarily to standard genetic operators, which are uniquely based on the syntax of the individuals, these new operators…

Neural and Evolutionary Computing · Computer Science 2012-08-14 Mauro Castelli , Luca Manzoni , Leonardo Vanneschi

Two models of candidates for hereditary symmetry operators are proposed and thus many nonlinear systems of evolution equations possessing infinitely many commutative symmetries may be generated. Some concrete structures of hereditary…

solv-int · Physics 2009-10-31 Wen-Xiu MA

A frame is a generalization of a basis of a vector space to a redundant overspanning set whose vectors are linearly dependent. Frames find applications in signal processing and quantum information theory. We present a genetic algorithm that…

Computational Physics · Physics 2025-08-13 Sebastián Roca-Jerat , Juan Román-Roche

The conception of multi-alphabetical genetics is represented. Matrix forms of the representation of the multi-level system of molecular-genetic alphabets have revealed algebraic properties of this system. These properties are connected with…

Other Quantitative Biology · Quantitative Biology 2013-01-18 Sergey V. Petoukhov

Multidimensional genetic programming represents candidate solutions as sets of programs, and thereby provides an interesting framework for exploiting building block identification. Towards this goal, we investigate the use of machine…

Neural and Evolutionary Computing · Computer Science 2019-04-19 William La Cava , Jason H. Moore

How to represent the genetic code? Despite the fact that it is extensively known, the DNA mapping into proteins remains as one of the relevant discoveries of genetics. However, modern genomic signal processing usually requires converting…

Other Quantitative Biology · Quantitative Biology 2015-03-10 H. M. de Oliveira , N. S. Santos-Magalhaes

The research community continues to seek increasingly more advanced synthetic data generators to reliably evaluate the strengths and limitations of machine learning methods. This work aims to increase the availability of datasets…

Machine Learning · Computer Science 2026-01-30 Joanna Komorniczak

Genetic algorithms, computer programs that simulate natural evolution, are increasingly applied across many disciplines. They have been used to solve various optimisation problems from neural network architecture search to strategic games,…

Neural and Evolutionary Computing · Computer Science 2021-09-14 Aymeric Vie , Alissa M. Kleinnijenhuis , Doyne J. Farmer

We demonstrate how a genetic algorithm solves the problem of minimizing the resources used for network coding, subject to a throughput constraint, in a multicast scenario. A genetic algorithm avoids the computational complexity that makes…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Minkyu Kim , Varun Aggarwal , Una-May O'Reilly , Muriel Medard , Wonsik Kim

This paper explores operators with countable, continuous, and hybrid spectra, focusing on both finite dimensional and infinite dimensional cases, particularly in non-Hermitian systems. For finite dimensional operators, a novel concept of…

Functional Analysis · Mathematics 2024-11-20 Shih-Yu Chang

A genetic algorithm is suitable for exploring large search spaces as it finds an approximate solution. Because of this advantage, genetic algorithm is effective in exploring vast and unknown space such as molecular search space. Though the…

Neural and Evolutionary Computing · Computer Science 2021-12-24 Yurim Lee , Gydam Choi , Minsung Yoon , Cheongwon Kim

We introduce Residue Hyperdimensional Computing, a computing framework that unifies residue number systems with an algebra defined over random, high-dimensional vectors. We show how residue numbers can be represented as high-dimensional…

Neural and Evolutionary Computing · Computer Science 2023-11-09 Christopher J. Kymn , Denis Kleyko , E. Paxon Frady , Connor Bybee , Pentti Kanerva , Friedrich T. Sommer , Bruno A. Olshausen

Here we propose an evolutionary algorithm that self modifies its operators at the same time that candidate solutions are evolved. This tackles convergence and lack of diversity issues, leading to better solutions. Operators are represented…

Neural and Evolutionary Computing · Computer Science 2017-12-19 Andres Felipe Cruz Salinas , Jonatan Gomez Perdomo

This work was inspired by author experiences with a telescope scheduling. Author long time goal is to develop and further extend software for an autonomous observatory. The software shall provide users with all the facilities they need to…

Artificial Intelligence · Computer Science 2010-02-02 Petr Kubanek

The talk describes a general approach of a genetic algorithm for multiple objective optimization problems. A particular dominance relation between the individuals of the population is used to define a fitness operator, enabling the genetic…

Artificial Intelligence · Computer Science 2008-09-03 Martin Josef Geiger

This paper investigates the use of more than one crossover operator to enhance the performance of genetic algorithms. Novel crossover operators are proposed such as the Collision crossover, which is based on the physical rules of elastic…

Neural and Evolutionary Computing · Computer Science 2018-01-09 Ahmad B. A. Hassanat , Esra'a Alkafaween

Functions of chemical composition are complex and discrete in nature making it impossible to optimize them with gradient methods. Genetic algorithms, which do not use derivative information, are used to maximize the thermal conductivity of…

Materials Science · Physics 2018-01-30 Alexander Kerr , Kieran Mullen
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