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Conventional phase-field models often drive solid-solid interfaces to coalesce when in close proximity. This feature limits their use for processes like diffusion bonding, where the interfaces might need to remain distinct under certain…

Materials Science · Physics 2026-02-20 Maryam Khodadad , Noel Walkington , Suresh Kalyanam , Matteo Pozzi , Kaushik Dayal

Understanding transcription factor dynamics is crucial for unraveling the regulatory mechanisms of gene expression that underpin cellular function and development. Measurements of transcription factor subcellular movements are essential for…

Quantitative Methods · Quantitative Biology 2025-03-20 Sharva V. Hiremath , Etika Goyal , Gregory T. Reeves , Cranos M. Williams

Kinetic models are essential for describing how molecules interact in a variety of biochemical processes. The estimation of a model's kinetic parameters by experiment enables researchers to understand how pathogens, such as viruses,…

Quantum Physics · Physics 2022-03-02 K. T. Mpofu , C. Lee , G. E. M. Maguire , H. G. Kruger , M. S. Tame

Metabolic fluxes are the rates of life-sustaining chemical reactions within a cell and metabolites are the components. Determining the changes in these fluxes is crucial to understanding diseases with metabolic causes and consequences.…

Dynamical Systems · Mathematics 2024-07-15 Breanna Guppy , Colleen Mitchell , Eric Taylor

We report on a Digital Image Correlation-based technique for the detection of in-plane elastic waves propagating in structural lattices. The experimental characterization of wave motion in lattice structures is currently of great interest…

Classical Physics · Physics 2016-09-29 Marshall Schaeffer , Giuseppe Trainiti , Massimo Ruzzene

The impedance probe is a measurement device to measure plasma parameter like electron density. It consists of one electrode connected to a network analyzer via a coaxial cable and is immersed into a plasma. A bias potential superposed with…

Plasma Physics · Physics 2018-05-09 Jens Oberrath

Simulations and observations of the low-latitude magnetosphere-magnetosheath boundary layer indicate that the Kelvin-Helmholtz instability (KHI) drives vortex structures that enhance plasma mixing and magnetic reconnection, influencing…

Plasma Physics · Physics 2026-05-06 Silvia Ferro , Fabio Bacchini , Giuseppe Arrò , Francesco Pucci , Pierre Henri

Many types of cells can sense external ligand concentrations with cell-surface receptors at extremely high accuracy. Interestingly, ligand-bound receptors are often internalized, a process also known as receptor-mediated endocytosis. While…

Biological Physics · Physics 2015-05-18 Gerardo Aquino , Robert G. Endres

Cells measure concentrations of external ligands by capturing ligand molecules with cell surface receptors. The numbers of molecules captured by different receptors co-vary because they depend on the same extrinsic ligand fluctuations.…

Neurons and Cognition · Quantitative Biology 2016-09-21 Vijay Singh , Martin Tchernookov , Ilya Nemenman

Surface plasmon resonance (SPR) chips are widely used to measure association and dissociation rates for the binding kinetics between two species of chemicals, e.g., cell receptors and ligands. It is commonly assumed that ligands are…

Quantitative Methods · Quantitative Biology 2016-12-07 Jacob Carroll , Matthew Raum , Kimberly Forsten-Williams , Uwe C. Täuber

We present a widefield fluorescence microscope that integrates an event-based image sensor (EBIS) with a CMOS image sensor (CIS) for ultra-fast microscopy with spectral distinction capabilities. The EBIS achieves temporal resolution of…

Optics · Physics 2024-10-22 Richard G. Baird , Apratim Majumder , Rajesh Menon

A system's internal dynamics and its interaction with the environment can be determined by tracking how external perturbations affect its transition rates between states. Quantitative measurements of these rates are crucial for optimizing…

A prototype of digital frequency multiplexing electronics allowing the real time monitoring of microwave kinetic inductance detector (MKIDs) arrays for mm-wave astronomy has been developed. Thanks to the frequency multiplexing, it can…

Instrumentation and Methods for Astrophysics · Physics 2012-07-12 O. Bourrion , C. Vescovi , J. L. Bouly , A. Benoit , M. Calvo , L. Gallin-Martel , J. F. Macias-Perez , A. Monfardini

Microwave kinetic inductance detector (MKID) provides a way to build large ground based sub-mm instruments such as NIKA and A-MKID. For such instruments, therefore, it is important to understand and characterize the response to ensure good…

Instrumentation and Methods for Astrophysics · Physics 2016-02-15 L. Bisigello , S. J. C. Yates , V. Murugesan , J. J. A. Baselmans , A. M. Baryshev

We utilize a multiscale modeling framework to study the effect of shape, size and ligand composition on the efficacy of binding of a ligand-coated-particle to a substrate functionalized with the target receptors. First, we show how…

Soft Condensed Matter · Physics 2018-03-08 Matt McKenzie , Sung Min Ha , Aravind Rammohan , Ravi Radhakrishnan , N. Ramakrishnan

We discuss theoretical models for the cooperative binding dynamics of ligands to substrates, such as dimeric motor proteins to microtubules or more extended macromolecules like tropomyosin to actin filaments. We study the effects of steric…

Soft Condensed Matter · Physics 2007-05-23 Erwin Frey , Andrej Vilfan

An extension of the Kinetic Ising model with nonuniform coupling constants on a one-dimensional lattice with boundaries is investigated, and the relaxation of such a system towards its equilibrium is studied. Using a transfer matrix method,…

Statistical Mechanics · Physics 2010-10-20 Mohammad Khorrami , Amir Aghamohammadi

Due to its specificity, fluorescence microscopy (FM) has become a quintessential imaging tool in cell biology. However, photobleaching, phototoxicity, and related artifacts continue to limit FM's utility. Recently, it has been shown that…

From nutrient uptake, to chemoreception, to synaptic transmission, many systems in cell biology depend on molecules diffusing and binding to membrane receptors. Mathematical analysis of such systems often neglects the fact that receptors…

Quantitative Methods · Quantitative Biology 2021-06-16 Gregory Handy , Sean D Lawley

From biology and astronomy to quantum optics, there is a critical need for high frame rate, high quantum efficiency imaging. In practice, most cameras only satisfy one of these requirements. Here we introduce interlaced fast kinetics…

Atomic Physics · Physics 2025-05-21 Bowen Li , Lukas Palm , Marius Jürgensen , Yiming Cady Feng , Markus Greiner , Jon Simon