Related papers: Knotted Nematics
Using a lattice model of polymers in a tube, we define one way to characterise different configurations of a given knot as either "local" or "non-local" and, for several ring polymer models, we provide both theoretical and numerical…
Knotted proteins embed a physical (i.e., open) knot within their native structures. For decades, significant effort has been devoted to elucidating the functional role of knots in proteins, yet no consensus has been reached. Here, using…
In this paper we outline a topological framework for constructing 2-periodic knitted stitches and an algebra for joining stitches together to form more complicated textiles. Our topological framework can be constructed from certain…
Links and knots are exotic topological structures that have garnered significant interest across multiple branches of natural sciences. Coherent links and knots, such as those constructed by phase or polarization singularities of coherent…
Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…
We prove that each overtwisted contact structure has knot types that are represented by infinitely many distinct transverse knots all with the same self-linking number. In some cases, we can even classify all such knots. We also show…
Motivated by recent experiments on the rod-like virus bacteriophage fd, confined to circular and annular domains, we present a theoretical study of structural transitions in these geometries. Using the continuum theory of nematic liquid…
Knots are deeply entangled with every branch of science. One of the biggest open challenges in knot theory is to formalise a knot invariant that can unambiguously and efficiently distinguish any two knotted curves. Additionally, the…
A special class of braids, called woven, is introduced and it is shown that every conjugation class of the braid group contains woven braids. In consequence, links can be presented as plats or closures of woven braids. Restricting on knots,…
The paper is devoted to relations between topological and metric properties of germs of real surfaces, obtained by analytic maps from $R^2$ to $R^4$. We show that for a big class of such surfaces the normal embedding property implies the…
This work identifies a class of moves on knots which translate to $m$-equivalences of the associated $p$-fold branched cyclic covers, for a fixed $m$ and any $p$ (with respect to the Goussarov-Habiro filtration.) These moves are applied to…
The existence of stable links and knots is demonstrated in three-dimensional, bistable, chemical media. The reaction-diffusion medium segregates into regions of high and low concentration separated by sharp interfaces. The interfaces repel…
We propose a general formalism to characterize orientational frustration of smectic liquid crystals in confinement by interpreting the emerging networks of grain boundaries as objects with a topological charge. In a formal idealization,…
In this note, I describe a formalism for treating knots as geometric spaces, and make an application to a simple statistical mechanics computation. The motivation for this study is the natural visual symmetry of the knot, and I describe how…
Optical knots and links, consisting of trajectories of phase or polarisation singularities, are intriguing nontrivial three-dimensional topologies. They are theoretically predicted and experimentally observed in paraxial and non-paraxial…
We introduce a relation of cobordism for knots in thickened surfaces and study cobordism invariants of such knots.
Using the covering involution on the double branched cover of the three-sphere branched along a knot, and adapting ideas of Hendricks-Manolescu and Hendricks-Hom-Lidman, we define new knot invariants and apply them to deduce novel linear…
We prove that certain problems naturally arising in knot theory are NP--hard or NP--complete. These are the problems of obtaining one diagram from another one of a link in a bounded number of Reidemeister moves, determining whether a link…
A nematic liquid crystal in contact with a grating surface possessing an alternating stripe pattern of locally homeotropic and planar anchoring is studied within the Frank--Oseen model. The combination of both chemical and geometrical…
Knot theory provides a powerful tool for the understanding of topological matters in biology, chemistry, and physics. Here knot theory is introduced to describe topological phases in the quantum spin system. Exactly solvable models with…