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This article presents svds-C, an open-source and high-performance C program for accurately and robustly computing truncated SVD, e.g. computing several largest singular values and corresponding singular vectors. We have re-implemented the…

Mathematical Software · Computer Science 2024-05-30 Xu Feng , Wenjian Yu , Yuyang Xie

Recently, graphics processors (GPUs) have been increasingly leveraged in a variety of scientific computing applications. However, architectural differences between CPUs and GPUs necessitate the development of algorithms that take advantage…

Mathematical Software · Computer Science 2015-01-05 Jonathan Wong , Ellen Kuhl , Eric Darve

Computing the product of two sparse matrices (SpGEMM) is a fundamental operation in various combinatorial and graph algorithms as well as various bioinformatics and data analytics applications for computing inner-product similarities. For…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-22 Srđan Milaković , Oguz Selvitopi , Israt Nisa , Zoran Budimlić , Aydin Buluc

We introduce an algorithm for efficiently representing convolution with zero-padding and stride as a sparse transformation matrix, applied to a vectorized input through sparse matrix-vector multiplication (SpMV). We provide a theoretical…

Machine Learning · Computer Science 2024-12-02 Zan Chaudhry

The sparse matrix/vector product (SpMV) is a fundamental operation in scientific computing. Having access to an efficient SpMV implementation is therefore critical, if not mandatory, to solve challenging numerical problems. The ARM-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-28 Evann Regnault , Berenger Bramas

Multiplying two sparse matrices (SpGEMM) is a common computational primitive used in many areas including graph algorithms, bioinformatics, algebraic multigrid solvers, and randomized sketching. Distributed-memory parallel algorithms for…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-28 Yuxi Hong , Aydin Buluc

Sparse general matrix multiplication (SpGEMM) is a fundamental building block for many real-world applications. Since SpGEMM is a well-known memory-bounded application with vast and irregular memory accesses, considering the memory access…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-22 Zhaoyang Du , Yijin Guan , Tianchan Guan , Dimin Niu , Hongzhong Zheng , Yuan Xie

Sparse General Matrix Multiply (SpGEMM) is key for various High-Performance Computing (HPC) applications such as genomics and graph analytics. Using the semiring abstraction, many algorithms can be formulated as SpGEMM, allowing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-23 Thomas McFarland , Julian Bellavita , Giulia Guidi

Graph neural networks (GNNs) are emerging as a powerful technique for modeling graph structures. Due to the sparsity of real-world graph data, GNN performance is limited by extensive sparse matrix multiplication (SpMM) operations involved…

Machine Learning · Computer Science 2021-11-02 Shenghao Qiu , You Liang , Zheng Wang

Matrix-multiply-accumulate (MMA) units, or tensor cores, are now widespread across modern computing architectures. Yet, their use for particle-grid operators remains limited. In implicit particle methods, mass-matrix assembly is a…

Computational Engineering, Finance, and Science · Computer Science 2026-04-22 Luca Pennati , Stefano Markidis

Graph neural networks (GNNs) have emerged as a powerful tool to process graph-based data in fields like communication networks, molecular interactions, chemistry, social networks, and neuroscience. GNNs are characterized by the ultra-sparse…

Hardware Architecture · Computer Science 2023-07-14 Nanda K. Unnikrishnan , Joe Gould , Keshab K. Parhi

In recent years, novel AI accelerators have emerged as promising alternatives to GPU for AI model training and inference tasks. One such accelerator, the Cerebras CS-3, achieves strong performance on large model training as well as…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-01 Milan Shah , Sheng Di , Michela Becchi

The Singular Value Decomposition (SVD) is one of the most important matrix factorizations, enjoying a wide variety of applications across numerous application domains. In statistics and data analysis, the common applications of SVD such as…

Mathematical Software · Computer Science 2020-09-03 Drew Schmidt

This paper presents an efficient technique for matrix-vector and vector-transpose-matrix multiplication in distributed-memory parallel computing environments, where the matrices are unstructured, sparse, and have a substantially larger…

Mathematical Software · Computer Science 2018-12-04 Jonathan Eckstein , Gyorgy Matyasfalvi

Sparse matrix-vector multiplication (SpMV) multiplies a sparse matrix with a dense vector. SpMV plays a crucial role in many applications, from graph analytics to deep learning. The random memory accesses of the sparse matrix make…

Hardware Architecture · Computer Science 2022-05-10 Linghao Song , Yuze Chi , Licheng Guo , Jason Cong

As nowadays Machine Learning (ML) techniques are generating huge data collections, the problem of how to efficiently engineer their storage and operations is becoming of paramount importance. In this article we propose a new lossless…

Data Structures and Algorithms · Computer Science 2022-03-31 Paolo Ferragina , Travis Gagie , Dominik Köppl , Giovanni Manzini , Gonzalo Navarro , Manuel Striani , Francesco Tosoni

Graph Neural Networks (GNNs) have achieved significant improvements in various domains. Sparse Matrix-Matrix multiplication (SpMM) is a fundamental operator in GNNs, which performs a multiplication between a sparse matrix and a dense…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-08 Guyue Huang , Guohao Dai , Yu Wang , Huazhong Yang

In recent years, Transformer-based language models have become the standard approach for natural language processing tasks. However, stringent throughput and latency requirements in industrial applications are limiting their adoption. To…

Machine Learning · Computer Science 2023-06-30 Haihao Shen , Hengyu Meng , Bo Dong , Zhe Wang , Ofir Zafrir , Yi Ding , Yu Luo , Hanwen Chang , Qun Gao , Ziheng Wang , Guy Boudoukh , Moshe Wasserblat

In computational science and data analytics, many workloads involve irregular and sparse computations that are inherently difficult to optimize for modern hardware. A key kernel is Sparse General Matrix-Matrix Multiplication (SpGEMM), which…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-22 Yifan Li , Giulia Guidi

Achieving high performance for sparse applications is challenging due to irregular access patterns and weak locality. These properties preclude many static optimizations and degrade cache performance on traditional systems. To address these…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-12-17 Thomas B. Rolinger , Christopher D. Krieger
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