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Related papers: Hamiltonian replica-exchange in GROMACS: a flexibl…

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We present a quantum algorithm to obtain the response of the atomic nucleus to a small external electromagnetic perturbation. The Hamiltonian of the system is presented by a harmonic oscillator, and the linear combination of unitaries (LCU)…

Quantum Physics · Physics 2022-10-18 Abhishek , Nifeeya Singh , Pooja Siwach , P. Arumugam

The Hamiltonian formalism plays a central role in classical and quantum physics. Hamiltonians are the main tool for modelling the continuous time evolution of systems with conserved quantities, and they come equipped with many useful…

Machine Learning · Computer Science 2020-02-17 Peter Toth , Danilo Jimenez Rezende , Andrew Jaegle , Sébastien Racanière , Aleksandar Botev , Irina Higgins

Hamiltonian systems with multiple timescales arise in molecular dynamics, classical mechanics, and theoretical physics. Long-time numerical integration of such systems requires resolving fast dynamics with very small time steps, which…

Numerical Analysis · Mathematics 2025-10-30 Rui Fang , Richard Tsai

The canonical Hamiltonian $H_C$ of the metric General Relativity is reduced to its natural form. The natural form of canonical Hamiltonian provides numerous advantages in actual applications to the metric GR, since the general theory of…

General Relativity and Quantum Cosmology · Physics 2020-01-14 Alexei M. Frolov

We derive the dynamics of several rigid bodies of arbitrary shape in a 2-dimensional inviscid and incompressible fluid, whose vorticity field is given by point vortices. We adopt the idea of Vankerschaver et al. (2009) to derive the…

Fluid Dynamics · Physics 2014-02-27 Steffen Weissmann

This paper presents a useful compact formula for deriving an effective Hamiltonian describing the time-averaged dynamics of detuned quantum systems. The formalism also works for ensemble-averaged dynamics of stochastic systems. To…

Quantum Physics · Physics 2009-11-13 Daniel F. V. James , Jonathan Jerke

Many promising quantum applications depend on the efficient quantum simulation of an exponentially large sparse Hamiltonian, a task known as sparse Hamiltonian simulation, which is fundamentally important in quantum computation. Although…

Quantum Physics · Physics 2025-09-16 Jiaqi Leng , Joseph Li , Yuxiang Peng , Xiaodi Wu

We combine replica exchange (parallel tempering) with normalizing flows, a class of deep generative models. These two sampling strategies complement each other, resulting in an efficient strategy for sampling molecular systems characterized…

Computational Physics · Physics 2022-12-14 Michele Invernizzi , Andreas Krämer , Cecilia Clementi , Frank Noé

The focus of the thesis is to obtain a universal formalism to evaluate the perturbations during inflation at all orders that can be applied to any theory of gravity and matter source in the early universe. We first look at the equivalence…

General Relativity and Quantum Cosmology · Physics 2018-01-10 Debottam Nandi

The Hamiltonian for a system of relativistic bodies interacting by their gravitational field is found in the post-Minkowskian approximation, including all terms linear in the gravitational constant. It is given in a surprisingly simple…

General Relativity and Quantum Cosmology · Physics 2010-03-03 Tomas Ledvinka , Gerhard Schaefer , Jiri Bicak

We describe a path-integral approach for including nuclear quantum effects in non-adiabatic chemical dynamics simulations. For a general physical system with multiple electronic energy levels, a corresponding isomorphic Hamiltonian is…

Statistical Mechanics · Physics 2018-06-05 Xuecheng Tao , Philip Shushkov , Thomas Miller

The effective Hamiltonian method is a powerful tool for simulating large-scale systems across a wide range of temperatures. However, previous methods for constructing effective Hamiltonian models suffer from key limitations: some require to…

Computational Physics · Physics 2025-05-09 Yang Cheng , Binhua Zhang , Xueyang Li , Hongyu Yu , Changsong Xu , Hongjun Xiang

A universal family of Hamiltonians can be used to simulate any local Hamiltonian by encoding its full spectrum as the low-energy subspace of a Hamiltonian from the family. Many spin-lattice model Hamiltonians -- such as Heisenberg or XY…

Quantum Physics · Physics 2021-02-08 Leo Zhou , Dorit Aharonov

Many areas of chemistry are devoted to the challenge of understanding, predicting, and controlling the behavior of strongly localized electrons. Examples include molecular magnetism and luminescence, color centers in crystals,…

Chemical Physics · Physics 2022-09-08 R. Matthias Geilhufe , Jeffrey D. Rinehart

The paper proposes a Riemannian Manifold Hamiltonian Monte Carlo sampler to resolve the shortcomings of existing Monte Carlo algorithms when sampling from target densities that may be high dimensional and exhibit strong correlations. The…

Computation · Statistics 2019-12-18 Mark Girolami , Ben Calderhead , Siu A. Chin

James' effective Hamiltonian method has been extensively adopted to investigate largely detuned interacting quantum systems. This method is just corresponding to the second-order perturbation theory, and cannot be exploited to treat the…

Quantum Physics · Physics 2017-04-05 Wenjun Shao , Chunfeng Wu , Xun-Li Feng

Manipulating Hamiltonians governing physical systems has found a broad range of applications, from quantum chemistry to semiconductor design. In this work, we provide a new way of manipulating Hamiltonians, by transforming their eigenvalues…

Quantum Physics · Physics 2025-04-30 Tatsuki Odake , Hlér Kristjánsson , Philip Taranto , Mio Murao

GROMACS is a widely-used molecular dynamics software package with a focus on performance, portability, and maintainability across a broad range of platforms. Thanks to its early algorithmic redesign and flexible heterogeneous…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-26 Andrey Alekseenko , Szilárd Páll , Erik Lindahl

The adiabatic quantum algorithm has drawn intense interest as a potential approach to accelerating optimization tasks using quantum computation. The algorithm is most naturally realised in systems which support Hamiltonian evolution, rather…

Quantum Physics · Physics 2019-10-02 Liming Zhao , Carlos A. Perez-Delgado , Simon C. Benjamin , Joseph F. Fitzsimons

In this work we propose an approach for implementing time-evolution of a quantum system using product formulas. The quantum algorithms we develop have provably better scaling (in terms of gate complexity and circuit depth) than a naive…