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The standard models of sequence evolution on a tree determine probabilities for every character or site pattern. A flattening is an arrangement of these probabilities into a matrix, with rows corresponding to all possible site patterns for…

Populations and Evolution · Quantitative Biology 2021-12-10 Jandre Snyman , Colin Fox , David Bryant

This paper initiates the study of shortening universal cycles (u-cycles) and universal words (u-words) for permutations either by using incomparable elements, or by using non-deterministic symbols. The latter approach is similar in nature…

Combinatorics · Mathematics 2018-11-01 Sergey Kitaev , Vladimir N. Potapov , Vincent Vajnovszki

We present a simplified variant of Biane's bijection between permutations and 3-colored Motzkin paths with weight that keeps track of the inversion number, excedance number and a statistic so-called depth of a permutation. This generalizes…

Combinatorics · Mathematics 2024-06-25 Sen-Peng Eu , Tung-Shan Fu , Yuan-Hsun Lo

Inspired by a recent note of Zeilberger (arXiv:1110.4379), Alejandro Morales asked whether one can count alternating (i.e., up-down) permutations that contain the pattern 123 or 321 exactly once. In this note we answer the question in the…

Combinatorics · Mathematics 2011-11-07 Joel Brewster Lewis

We review selected known results on partially ordered patterns (POPs) that include co-unimodal, multi- and shuffle patterns, peaks and valleys ((modified) maxima and minima) in permutations, the Horse permutations and others. We provide…

Combinatorics · Mathematics 2007-05-23 Sergey Kitaev

We study aspects of the enumeration of permutation classes, sets of permutations closed downwards under the subpermutation order. First, we consider monotone grid classes of permutations. We present procedures for calculating the generating…

Combinatorics · Mathematics 2015-06-23 David Bevan

It is known that, when $n$ is even, the number of permutations of $\{1,2,\dots,n\}$ all of whose cycles have odd length equals the number of those all of whose cycles have even length. Adin, Heged\H{u}s and Roichman recently found a…

Combinatorics · Mathematics 2025-04-08 Sergi Elizalde

One of the most central result in combinatorics says that the descent statistic and the excedance statistic are equidistribued over the symmetric group. As a continuation of the work of Shareshian-Wachs (Adv. Math., 225(6) (2010),…

Combinatorics · Mathematics 2024-06-11 Shi-Mei Ma , Toufik Mansour , Yeong-Nan Yeh

In this paper, we first present combinatorial proofs of a kind of expansions of the Eulerian polynomials of types A and B, and then we introduce Stirling permutations of the second kind. In particular, we count Stirling permutations of the…

Combinatorics · Mathematics 2016-07-07 Shi-Mei Ma , Yeong-Nan Yeh

Remixed Eulerian numbers are a polynomial $q$-deformation of Postnikov's mixed Eulerian numbers. They arose naturally in previous work by the authors concerning the permutahedral variety and subsume well-known families of polynomials such…

Combinatorics · Mathematics 2022-09-20 Philippe Nadeau , Vasu Tewari

In this paper, we study classes of subexcedant functions enumerated by the Bell numbers and present bijections on set partitions. We present a set of permutations whose transposition arrays are the restricted growth functions, thus defining…

Combinatorics · Mathematics 2022-08-23 Fufa Beyene , Jörgen Backelin , Roberto Mantaci , Samuel A. Fufa

We study certain bijection between plane partitions and $\mathbb{N}$-matrices. As applications, we prove a Cauchy-type identity for generalized dual Grothendieck polynomials. We introduce two statistics on plane partitions, whose generating…

Combinatorics · Mathematics 2020-11-20 Damir Yeliussizov

Kitaev, Potapov, and Vajnovszki [On shortening u-cycles and u-words for permutations, Discrete Appl. Math, 2019] described how to shorten universal words for permutations, to length $n!+n-1-i(n-1)$ for any $i \in [(n-2)!]$, by introducing…

Combinatorics · Mathematics 2023-08-14 Rachel Kirsch , Bernard Lidický , Clare Sibley , Elizabeth Sprangel

Subword complexes were defined by A.Knutson and E.Miller in 2004 for describing Gr\"obner degenerations of matrix Schubert varieties. The facets of such a complex are indexed by pipe dreams, or, equivalently, by the monomials in the…

Combinatorics · Mathematics 2022-08-24 Evgeny Smirnov , Anna Tutubalina

In this paper, the asymptotic formulas for Eulerian numbers, refined Eulerian numbers and the coefficients of descent polynomials are obtained directly from the spline interpretations of these numbers. Having related these numbers directly…

Combinatorics · Mathematics 2010-02-02 Renhong Wang , Yan Xu

The study of pattern avoidance in permutations, and specifically in flattened partitions is an active area of current research. In this paper, we count the number of distinct flattened partitions over [n] avoiding a single pattern, as well…

Combinatorics · Mathematics 2020-11-17 Olivia Nabawanda , Fanja Rakotondrajao

Learning distributions over permutations is a fundamental problem in machine learning, with applications in ranking, combinatorial optimization, structured prediction, and data association. Existing methods rely on mixtures of parametric…

Machine Learning · Computer Science 2025-06-02 Daniel Severo , Brian Karrer , Niklas Nolte

We investigate the $\alpha$-colored Eulerian polynomials and a notion of descents introduced in a recent paper of Hedmark and show that such polynomials can be computed as a polynomial encoding descents computed over a quotient of the…

Combinatorics · Mathematics 2016-11-22 Dustin Hedmark , Cyrus Hettle , McCabe Olsen

We explore a bijection between permutations and colored Motzkin paths that has been used in different forms by Foata and Zeilberger, Biane, and Corteel. By giving a visual representation of this bijection in terms of so-called cycle…

Combinatorics · Mathematics 2023-06-22 Sergi Elizalde

An avoidance pattern where the letters within an occurrence of which are required to be adjacent is referred to as a subword. In this paper, we enumerate members of the set NC_n of non-crossing partitions of length n according to the number…

Combinatorics · Mathematics 2023-03-14 Mark Shattuck